CAMTA1

 

Full name: calmodulin binding transcription activator 1 Alias Symbol: KIAA0833
Type: protein-coding gene Cytoband: 1p36.31-p36.23
Entrez ID: 23261 HGNC ID: HGNC:18806 Ensembl Gene: ENSG00000171735 OMIM ID: 611501
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of CAMTA1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CAMTA1 23261 225692_at -0.0099 0.9885
GSE20347 CAMTA1 23261 213268_at 0.5179 0.0462
GSE23400 CAMTA1 23261 213268_at 0.1061 0.0122
GSE26886 CAMTA1 23261 225692_at 0.5783 0.0037
GSE29001 CAMTA1 23261 213268_at 0.5809 0.3132
GSE38129 CAMTA1 23261 213268_at 0.5032 0.0726
GSE45670 CAMTA1 23261 225692_at -0.1492 0.3690
GSE53622 CAMTA1 23261 78331 -0.3268 0.0000
GSE53624 CAMTA1 23261 78331 -0.0280 0.6170
GSE63941 CAMTA1 23261 225693_s_at 0.2569 0.6553
GSE77861 CAMTA1 23261 225693_s_at -0.3143 0.1790
GSE97050 CAMTA1 A_21_P0000131 -0.5871 0.1421
SRP007169 CAMTA1 23261 RNAseq -0.2534 0.5358
SRP008496 CAMTA1 23261 RNAseq 0.0584 0.8453
SRP064894 CAMTA1 23261 RNAseq 0.3217 0.2556
SRP133303 CAMTA1 23261 RNAseq 0.1396 0.4273
SRP159526 CAMTA1 23261 RNAseq 0.0496 0.8760
SRP193095 CAMTA1 23261 RNAseq 0.0304 0.7859
SRP219564 CAMTA1 23261 RNAseq -0.3244 0.4677
TCGA CAMTA1 23261 RNAseq -0.0394 0.5104

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CAMTA1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CAMTA1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CAMTA1 23261 2 5 23
GSE20123 CAMTA1 23261 2 5 23
GSE43470 CAMTA1 23261 6 5 32
GSE46452 CAMTA1 23261 7 1 51
GSE47630 CAMTA1 23261 8 4 28
GSE54993 CAMTA1 23261 3 2 65
GSE54994 CAMTA1 23261 14 3 36
GSE60625 CAMTA1 23261 0 0 11
GSE74703 CAMTA1 23261 5 3 28
GSE74704 CAMTA1 23261 2 1 17
TCGA CAMTA1 23261 12 24 60

Total number of gains: 61; Total number of losses: 53; Total Number of normals: 374.  


 

Somatic mutations of CAMTA1:

 

Generating mutation plots.

 

Highly correlated genes for CAMTA1:

 

Showing top 20/413 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CAMTA1ZNF1360.794448303
CAMTA1COMMD70.779295303
CAMTA1C6orf1360.755606303
CAMTA1LRRC140.750566303
CAMTA1GDF90.746337303
CAMTA1SDAD10.745097303
CAMTA1TESK10.74472303
CAMTA1RPS270.744306303
CAMTA1DHPS0.74379303
CAMTA1BRAP0.735435303
CAMTA1SLC39A130.732363303
CAMTA1OMA10.727216303
CAMTA1TAB10.725237403
CAMTA1ZNF6270.720114303
CAMTA1AKAP110.719277303
CAMTA1KAT6B0.719051303
CAMTA1RGS10.716351303
CAMTA1CENPV0.715052303
CAMTA1MRPL180.713716303
CAMTA1RPS140.711818303

For details and further investigation, click here