C8orf34

 

Full name: chromosome 8 open reading frame 34 Alias Symbol: vest-1|VEST1
Type: protein-coding gene Cytoband: 8q13.2
Entrez ID: 116328 HGNC ID: HGNC:30905 Ensembl Gene: ENSG00000165084 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C8orf34:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C8orf34 116328 231380_at -0.1312 0.6391
GSE26886 C8orf34 116328 231380_at 0.1922 0.1467
GSE45670 C8orf34 116328 231380_at -0.3027 0.1301
GSE53622 C8orf34 116328 42926 -0.5982 0.0000
GSE53624 C8orf34 116328 42926 -0.3910 0.0009
GSE63941 C8orf34 116328 231380_at -2.4739 0.0000
GSE77861 C8orf34 116328 231380_at -0.0661 0.4495
SRP064894 C8orf34 116328 RNAseq -0.7065 0.0372
SRP133303 C8orf34 116328 RNAseq -0.7943 0.0000
SRP159526 C8orf34 116328 RNAseq -1.2552 0.0111
SRP193095 C8orf34 116328 RNAseq -0.3157 0.1949
SRP219564 C8orf34 116328 RNAseq -0.9282 0.0675
TCGA C8orf34 116328 RNAseq -1.6233 0.0008

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by C8orf34 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C8orf34:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C8orf34 116328 15 1 14
GSE20123 C8orf34 116328 16 1 13
GSE43470 C8orf34 116328 16 3 24
GSE46452 C8orf34 116328 20 2 37
GSE47630 C8orf34 116328 23 1 16
GSE54993 C8orf34 116328 0 19 51
GSE54994 C8orf34 116328 30 0 23
GSE60625 C8orf34 116328 0 4 7
GSE74703 C8orf34 116328 14 2 20
GSE74704 C8orf34 116328 11 0 9
TCGA C8orf34 116328 50 4 42

Total number of gains: 195; Total number of losses: 37; Total Number of normals: 256.  


 

Somatic mutations of C8orf34:

 

Generating mutation plots.

 

Highly correlated genes for C8orf34:

 

Showing top 20/161 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C8orf34TCEAL70.746245404
C8orf34TCF210.704811404
C8orf34USP9Y0.698083303
C8orf34HEPH0.698075403
C8orf34ZNF3820.695423303
C8orf34DDX3Y0.687099303
C8orf34ANO30.683478303
C8orf34GREM20.682985303
C8orf34GPC60.681127403
C8orf34FAM13C0.678451303
C8orf34ZNF4070.671855303
C8orf34LAMA20.670316504
C8orf34TGM20.665505303
C8orf34KERA0.664837303
C8orf34SYT110.662364403
C8orf34LEFTY10.660018303
C8orf34CYTL10.65843303
C8orf34TMEM1000.657662404
C8orf34SCG30.653724303
C8orf34TFPI20.651412303

For details and further investigation, click here