| Full name: RNA binding motif protein 43 | Alias Symbol: FLJ45645 | ||
| Type: protein-coding gene | Cytoband: 2q23.3 | ||
| Entrez ID: 375287 | HGNC ID: HGNC:24790 | Ensembl Gene: ENSG00000184898 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RBM43:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RBM43 | 375287 | 228304_at | -0.2289 | 0.7014 | |
| GSE26886 | RBM43 | 375287 | 228304_at | -0.3927 | 0.2755 | |
| GSE45670 | RBM43 | 375287 | 228304_at | -0.6871 | 0.0095 | |
| GSE53622 | RBM43 | 375287 | 27827 | 0.3133 | 0.0015 | |
| GSE53624 | RBM43 | 375287 | 27827 | 0.1301 | 0.2206 | |
| GSE63941 | RBM43 | 375287 | 228304_at | -3.1218 | 0.0002 | |
| GSE77861 | RBM43 | 375287 | 228304_at | 0.1076 | 0.4298 | |
| GSE97050 | RBM43 | 375287 | A_33_P3301381 | -0.1504 | 0.5333 | |
| SRP007169 | RBM43 | 375287 | RNAseq | -1.0625 | 0.0122 | |
| SRP008496 | RBM43 | 375287 | RNAseq | -0.3639 | 0.1970 | |
| SRP064894 | RBM43 | 375287 | RNAseq | 0.3104 | 0.2763 | |
| SRP133303 | RBM43 | 375287 | RNAseq | -0.1722 | 0.3112 | |
| SRP159526 | RBM43 | 375287 | RNAseq | -0.5916 | 0.1181 | |
| SRP193095 | RBM43 | 375287 | RNAseq | -0.1350 | 0.1653 | |
| SRP219564 | RBM43 | 375287 | RNAseq | -0.1765 | 0.6241 | |
| TCGA | RBM43 | 375287 | RNAseq | -0.1684 | 0.0766 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by RBM43 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RBM43:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RBM43 | 375287 | 3 | 2 | 25 | |
| GSE20123 | RBM43 | 375287 | 3 | 2 | 25 | |
| GSE43470 | RBM43 | 375287 | 3 | 1 | 39 | |
| GSE46452 | RBM43 | 375287 | 1 | 4 | 54 | |
| GSE47630 | RBM43 | 375287 | 5 | 3 | 32 | |
| GSE54993 | RBM43 | 375287 | 0 | 5 | 65 | |
| GSE54994 | RBM43 | 375287 | 11 | 2 | 40 | |
| GSE60625 | RBM43 | 375287 | 0 | 3 | 8 | |
| GSE74703 | RBM43 | 375287 | 2 | 1 | 33 | |
| GSE74704 | RBM43 | 375287 | 2 | 0 | 18 | |
| TCGA | RBM43 | 375287 | 20 | 8 | 68 |
Total number of gains: 50; Total number of losses: 31; Total Number of normals: 407.
Somatic mutations of RBM43:
Generating mutation plots.
Highly correlated genes for RBM43:
Showing top 20/134 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RBM43 | YY2 | 0.927833 | 3 | 0 | 3 |
| RBM43 | MRGPRG | 0.873507 | 3 | 0 | 3 |
| RBM43 | PRSS38 | 0.870875 | 3 | 0 | 3 |
| RBM43 | MYO1C | 0.858172 | 4 | 0 | 4 |
| RBM43 | C9orf153 | 0.856239 | 3 | 0 | 3 |
| RBM43 | LBX2 | 0.853437 | 3 | 0 | 3 |
| RBM43 | DCDC1 | 0.848707 | 3 | 0 | 3 |
| RBM43 | SLC22A7 | 0.837632 | 3 | 0 | 3 |
| RBM43 | OR2B11 | 0.833561 | 3 | 0 | 3 |
| RBM43 | F2RL3 | 0.831627 | 3 | 0 | 3 |
| RBM43 | ROM1 | 0.829645 | 3 | 0 | 3 |
| RBM43 | C1QL2 | 0.823476 | 3 | 0 | 3 |
| RBM43 | BBC3 | 0.821657 | 3 | 0 | 3 |
| RBM43 | DEFB121 | 0.816508 | 3 | 0 | 3 |
| RBM43 | VHL | 0.814756 | 3 | 0 | 3 |
| RBM43 | SLC26A1 | 0.813902 | 3 | 0 | 3 |
| RBM43 | PLA2G2C | 0.811462 | 3 | 0 | 3 |
| RBM43 | OR10AD1 | 0.81052 | 3 | 0 | 3 |
| RBM43 | OR2T27 | 0.802808 | 3 | 0 | 3 |
| RBM43 | KRTAP10-12 | 0.79859 | 3 | 0 | 3 |
For details and further investigation, click here
