| Full name: chromosome 9 open reading frame 16 | Alias Symbol: EST00098|FLJ12823|MGC4639 | ||
| Type: protein-coding gene | Cytoband: 9q34.11 | ||
| Entrez ID: 79095 | HGNC ID: HGNC:17823 | Ensembl Gene: ENSG00000171159 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C9orf16:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C9orf16 | 79095 | 41047_at | 0.1051 | 0.8113 | |
| GSE20347 | C9orf16 | 79095 | 41047_at | -0.3023 | 0.0143 | |
| GSE23400 | C9orf16 | 79095 | 41047_at | 0.0776 | 0.2991 | |
| GSE26886 | C9orf16 | 79095 | 41047_at | 1.0739 | 0.0000 | |
| GSE29001 | C9orf16 | 79095 | 41047_at | -0.3074 | 0.3840 | |
| GSE38129 | C9orf16 | 79095 | 41047_at | -0.1257 | 0.2993 | |
| GSE45670 | C9orf16 | 79095 | 41047_at | 0.0581 | 0.7348 | |
| GSE53622 | C9orf16 | 79095 | 52306 | 0.0304 | 0.7584 | |
| GSE53624 | C9orf16 | 79095 | 52306 | 0.0712 | 0.3077 | |
| GSE63941 | C9orf16 | 79095 | 41047_at | 1.3709 | 0.0139 | |
| GSE77861 | C9orf16 | 79095 | 41047_at | -0.0986 | 0.6646 | |
| GSE97050 | C9orf16 | 79095 | A_23_P158053 | 0.3267 | 0.3405 | |
| SRP007169 | C9orf16 | 79095 | RNAseq | -0.9863 | 0.0221 | |
| SRP008496 | C9orf16 | 79095 | RNAseq | -0.7085 | 0.0113 | |
| SRP064894 | C9orf16 | 79095 | RNAseq | 0.4372 | 0.2978 | |
| SRP133303 | C9orf16 | 79095 | RNAseq | -0.1576 | 0.3151 | |
| SRP159526 | C9orf16 | 79095 | RNAseq | 0.3216 | 0.2499 | |
| SRP193095 | C9orf16 | 79095 | RNAseq | -0.2348 | 0.1355 | |
| SRP219564 | C9orf16 | 79095 | RNAseq | 0.0742 | 0.8577 | |
| TCGA | C9orf16 | 79095 | RNAseq | 0.1596 | 0.0146 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by C9orf16 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C9orf16:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C9orf16 | 79095 | 6 | 9 | 15 | |
| GSE20123 | C9orf16 | 79095 | 6 | 9 | 15 | |
| GSE43470 | C9orf16 | 79095 | 5 | 7 | 31 | |
| GSE46452 | C9orf16 | 79095 | 6 | 13 | 40 | |
| GSE47630 | C9orf16 | 79095 | 3 | 16 | 21 | |
| GSE54993 | C9orf16 | 79095 | 3 | 3 | 64 | |
| GSE54994 | C9orf16 | 79095 | 11 | 8 | 34 | |
| GSE60625 | C9orf16 | 79095 | 0 | 0 | 11 | |
| GSE74703 | C9orf16 | 79095 | 5 | 5 | 26 | |
| GSE74704 | C9orf16 | 79095 | 3 | 7 | 10 | |
| TCGA | C9orf16 | 79095 | 27 | 25 | 44 |
Total number of gains: 75; Total number of losses: 102; Total Number of normals: 311.
Somatic mutations of C9orf16:
Generating mutation plots.
Highly correlated genes for C9orf16:
Showing top 20/514 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C9orf16 | NLGN3 | 0.787311 | 3 | 0 | 3 |
| C9orf16 | BCORL1 | 0.783398 | 3 | 0 | 3 |
| C9orf16 | NAA38 | 0.763776 | 3 | 0 | 3 |
| C9orf16 | DVL1 | 0.760116 | 3 | 0 | 3 |
| C9orf16 | ITGA3 | 0.756536 | 3 | 0 | 3 |
| C9orf16 | CPNE2 | 0.75254 | 3 | 0 | 3 |
| C9orf16 | TNK1 | 0.749681 | 5 | 0 | 4 |
| C9orf16 | C19orf54 | 0.744354 | 3 | 0 | 3 |
| C9orf16 | SH3BP2 | 0.743425 | 3 | 0 | 3 |
| C9orf16 | GGA2 | 0.739794 | 3 | 0 | 3 |
| C9orf16 | UBOX5 | 0.738132 | 3 | 0 | 3 |
| C9orf16 | EMILIN2 | 0.73338 | 3 | 0 | 3 |
| C9orf16 | MIER2 | 0.729299 | 4 | 0 | 4 |
| C9orf16 | GABRR2 | 0.728512 | 3 | 0 | 3 |
| C9orf16 | ANKRD65 | 0.726655 | 3 | 0 | 3 |
| C9orf16 | CASKIN2 | 0.726357 | 4 | 0 | 4 |
| C9orf16 | SRL | 0.723702 | 3 | 0 | 3 |
| C9orf16 | PROX1 | 0.723573 | 3 | 0 | 3 |
| C9orf16 | ELMOD3 | 0.722994 | 3 | 0 | 3 |
| C9orf16 | PPP1R35 | 0.720143 | 4 | 0 | 3 |
For details and further investigation, click here
