UBOX5

 

Full name: U-box domain containing 5 Alias Symbol: UIP5|KIAA0860|Ubce7ip5|RNF37
Type: protein-coding gene Cytoband: 20p13
Entrez ID: 22888 HGNC ID: HGNC:17777 Ensembl Gene: ENSG00000185019 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of UBOX5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 UBOX5 22888 215544_s_at 0.1270 0.6272
GSE20347 UBOX5 22888 204598_at 0.0732 0.5149
GSE23400 UBOX5 22888 204598_at -0.0896 0.0102
GSE26886 UBOX5 22888 204598_at 0.3003 0.0201
GSE29001 UBOX5 22888 204598_at -0.0164 0.9368
GSE38129 UBOX5 22888 204598_at -0.0699 0.4909
GSE45670 UBOX5 22888 204598_at -0.1086 0.2259
GSE53622 UBOX5 22888 43553 -0.4437 0.0006
GSE53624 UBOX5 22888 43553 0.0110 0.9088
GSE63941 UBOX5 22888 204598_at 0.7359 0.0029
GSE77861 UBOX5 22888 204598_at 0.0297 0.8168
SRP007169 UBOX5 22888 RNAseq -1.8516 0.0001
SRP008496 UBOX5 22888 RNAseq -1.1544 0.0024
SRP064894 UBOX5 22888 RNAseq -0.0240 0.9077
SRP133303 UBOX5 22888 RNAseq -0.1919 0.1134
SRP159526 UBOX5 22888 RNAseq 0.0381 0.8094
SRP193095 UBOX5 22888 RNAseq 0.0692 0.5232
SRP219564 UBOX5 22888 RNAseq 0.2110 0.4674
TCGA UBOX5 22888 RNAseq -0.0939 0.1381

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by UBOX5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of UBOX5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 UBOX5 22888 12 3 15
GSE20123 UBOX5 22888 13 3 14
GSE43470 UBOX5 22888 10 1 32
GSE46452 UBOX5 22888 26 1 32
GSE47630 UBOX5 22888 18 4 18
GSE54993 UBOX5 22888 2 14 54
GSE54994 UBOX5 22888 24 2 27
GSE60625 UBOX5 22888 0 0 11
GSE74703 UBOX5 22888 9 1 26
GSE74704 UBOX5 22888 8 1 11
TCGA UBOX5 22888 40 11 45

Total number of gains: 162; Total number of losses: 41; Total Number of normals: 285.  


 

Somatic mutations of UBOX5:

 

Generating mutation plots.

 

Highly correlated genes for UBOX5:

 

Showing top 20/184 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
UBOX5C9orf160.738132303
UBOX5SLC8B10.668655303
UBOX5TNK10.668019404
UBOX5YBX20.657079404
UBOX5PARD6A0.652983404
UBOX5ANAPC20.647075303
UBOX5VAC140.646948303
UBOX5SOHLH20.645478303
UBOX5C10orf950.635197404
UBOX5GPR1-AS0.633877303
UBOX5MYL10.628401303
UBOX5SOGA10.623696504
UBOX5RBM190.614034303
UBOX5ARVCF0.611348504
UBOX5CST20.608983403
UBOX5PRAMEF120.604245504
UBOX5KLK140.603977403
UBOX5LMAN1L0.597508505
UBOX5RAB3IL10.595431505
UBOX5DNASE1L20.593715403

For details and further investigation, click here