CCDC142

 

Full name: coiled-coil domain containing 142 Alias Symbol: FLJ14397
Type: protein-coding gene Cytoband: 2p13.1
Entrez ID: 84865 HGNC ID: HGNC:25889 Ensembl Gene: ENSG00000135637 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of CCDC142:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCDC142 84865 239922_at 0.7033 0.2838
GSE26886 CCDC142 84865 239922_at 0.3940 0.0061
GSE45670 CCDC142 84865 239922_at 0.5755 0.0010
GSE53622 CCDC142 84865 64268 0.3931 0.0013
GSE53624 CCDC142 84865 64268 0.5133 0.0000
GSE63941 CCDC142 84865 239922_at 0.0112 0.9763
GSE77861 CCDC142 84865 239922_at 0.0817 0.3480
GSE97050 CCDC142 84865 A_23_P424712 0.0695 0.8202
SRP007169 CCDC142 84865 RNAseq 0.8636 0.0919
SRP008496 CCDC142 84865 RNAseq 0.9375 0.0090
SRP064894 CCDC142 84865 RNAseq 0.7302 0.0000
SRP133303 CCDC142 84865 RNAseq 0.2512 0.0291
SRP159526 CCDC142 84865 RNAseq 0.9040 0.0067
SRP193095 CCDC142 84865 RNAseq 0.3322 0.0009
SRP219564 CCDC142 84865 RNAseq 0.4353 0.2272
TCGA CCDC142 84865 RNAseq 0.1575 0.0248

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by CCDC142 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of CCDC142:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCDC142 84865 9 2 19
GSE20123 CCDC142 84865 10 2 18
GSE43470 CCDC142 84865 4 0 39
GSE46452 CCDC142 84865 2 3 54
GSE47630 CCDC142 84865 7 0 33
GSE54993 CCDC142 84865 0 6 64
GSE54994 CCDC142 84865 10 0 43
GSE60625 CCDC142 84865 0 3 8
GSE74703 CCDC142 84865 4 0 32
GSE74704 CCDC142 84865 8 0 12
TCGA CCDC142 84865 37 2 57

Total number of gains: 91; Total number of losses: 18; Total Number of normals: 379.  

 

Somatic mutations of CCDC142:

 

Generating mutation plots.

 

Highly correlated genes for CCDC142:

 

Showing top 20/172 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCDC142XRCC20.843153303
CCDC142ARHGAP220.796586303
CCDC142PRKAR1B0.783529303
CCDC142DMC10.782752303
CCDC142ZDHHC80.747196303
CCDC142HIVEP20.745004303
CCDC142PARP100.7397303
CCDC142PRMT50.738244303
CCDC142ARHGEF10.73693303
CCDC142SBNO20.733078303
CCDC142EFS0.731316403
CCDC142PGF0.727658303
CCDC142CDK160.72197303
CCDC142WDPCP0.713534403
CCDC142TONSL0.711413303
CCDC142MAMSTR0.710679303
CCDC142IPO90.7105303
CCDC142IL17RE0.709235303
CCDC142COL16A10.708957403
CCDC142TMEM520.707958303

For details and further investigation, click here