EFS

 

Full name: embryonal Fyn-associated substrate Alias Symbol: EFS2|EFS1|HEFS|SIN|CASS3
Type: protein-coding gene Cytoband: 14q11.2
Entrez ID: 10278 HGNC ID: HGNC:16898 Ensembl Gene: ENSG00000100842 OMIM ID: 609906
Drug and gene relationship at DGIdb

 

Expression of EFS:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EFS 10278 204400_at 0.0503 0.9774
GSE20347 EFS 10278 204400_at -0.1355 0.5293
GSE23400 EFS 10278 204400_at 0.1856 0.1251
GSE26886 EFS 10278 204400_at 0.4810 0.0224
GSE29001 EFS 10278 204400_at 0.2739 0.4360
GSE38129 EFS 10278 204400_at 0.0277 0.9196
GSE45670 EFS 10278 204400_at 0.3170 0.1659
GSE53622 EFS 10278 15967 0.0952 0.3912
GSE53624 EFS 10278 15967 0.0020 0.9824
GSE63941 EFS 10278 204400_at -0.5652 0.6937
GSE77861 EFS 10278 204400_at -0.0114 0.9814
GSE97050 EFS 10278 A_23_P48561 -0.1506 0.5999
SRP007169 EFS 10278 RNAseq -0.1885 0.6588
SRP008496 EFS 10278 RNAseq -0.2611 0.4250
SRP064894 EFS 10278 RNAseq 0.0628 0.7716
SRP133303 EFS 10278 RNAseq -0.2213 0.3805
SRP159526 EFS 10278 RNAseq 0.1546 0.5876
SRP219564 EFS 10278 RNAseq -0.0127 0.9804
TCGA EFS 10278 RNAseq 0.5087 0.0000

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by EFS expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EFS:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EFS 10278 9 1 20
GSE20123 EFS 10278 9 1 20
GSE43470 EFS 10278 7 2 34
GSE46452 EFS 10278 17 2 40
GSE47630 EFS 10278 11 10 19
GSE54993 EFS 10278 3 11 56
GSE54994 EFS 10278 18 5 30
GSE60625 EFS 10278 0 2 9
GSE74703 EFS 10278 6 2 28
GSE74704 EFS 10278 4 1 15
TCGA EFS 10278 27 14 55

Total number of gains: 111; Total number of losses: 51; Total Number of normals: 326.  


 

Somatic mutations of EFS:

 

Generating mutation plots.

 

Highly correlated genes for EFS:

 

Showing top 20/43 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EFSMYO1C0.752854303
EFSKCP0.738613303
EFSCCDC1420.731316403
EFSPNMA6A0.721947303
EFSCPAMD80.697891303
EFSRASEF0.674484303
EFSDOHH0.656624303
EFSFBRSL10.650882403
EFSIL17RE0.64961403
EFSWDPCP0.648346403
EFSEFNA30.629981403
EFSCDK130.626997503
EFSRIN10.625185504
EFSSYCE1L0.621611303
EFSSDR42E10.612879303
EFSKIFC20.611119403
EFSKLRG20.594687403
EFSCCDC1520.589278403
EFSHAUS50.589191403
EFSC19orf810.586905403

For details and further investigation, click here