CCDC61

 

Full name: coiled-coil domain containing 61 Alias Symbol: 
Type: protein-coding gene Cytoband: 19q13.32
Entrez ID: 729440 HGNC ID: HGNC:33629 Ensembl Gene: ENSG00000104983 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of CCDC61:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CCDC61 729440 228472_at 0.1721 0.7156
GSE26886 CCDC61 729440 228475_at -0.3158 0.0204
GSE45670 CCDC61 729440 228475_at -0.0046 0.9655
GSE53622 CCDC61 729440 58596 0.0988 0.1255
GSE53624 CCDC61 729440 58596 0.1514 0.0062
GSE63941 CCDC61 729440 228475_at 0.1630 0.2300
GSE77861 CCDC61 729440 228475_at -0.2025 0.1909
GSE97050 CCDC61 729440 A_23_P400147 0.3489 0.2124
SRP007169 CCDC61 729440 RNAseq -0.2926 0.5458
SRP008496 CCDC61 729440 RNAseq -0.1809 0.6987
SRP064894 CCDC61 729440 RNAseq 0.7796 0.0146
SRP133303 CCDC61 729440 RNAseq -0.1927 0.2509
SRP159526 CCDC61 729440 RNAseq -0.3320 0.1190
SRP193095 CCDC61 729440 RNAseq 0.1622 0.4101
SRP219564 CCDC61 729440 RNAseq -0.0328 0.8930
TCGA CCDC61 729440 RNAseq -0.1131 0.1294

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CCDC61 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CCDC61:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CCDC61 729440 4 5 21
GSE20123 CCDC61 729440 4 4 22
GSE43470 CCDC61 729440 3 11 29
GSE46452 CCDC61 729440 45 1 13
GSE47630 CCDC61 729440 8 7 25
GSE54993 CCDC61 729440 17 4 49
GSE54994 CCDC61 729440 5 13 35
GSE60625 CCDC61 729440 9 0 2
GSE74703 CCDC61 729440 3 7 26
GSE74704 CCDC61 729440 4 2 14
TCGA CCDC61 729440 16 15 65

Total number of gains: 118; Total number of losses: 69; Total Number of normals: 301.  


 

Somatic mutations of CCDC61:

 

Generating mutation plots.

 

Highly correlated genes for CCDC61:

 

Showing top 20/66 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CCDC61CCL170.706574303
CCDC61ITGA2B0.701398303
CCDC61GPATCH30.67756303
CCDC61SERPINA100.671035303
CCDC61DDC0.669551303
CCDC61AKR7A30.660579303
CCDC61IGSF220.659551403
CCDC61KLHL100.657692303
CCDC61CRYBB30.655303303
CCDC61GPR1820.650688403
CCDC61GRIPAP10.646588303
CCDC61ZBTB170.644986303
CCDC61HAAO0.638155403
CCDC61ALKBH20.629377403
CCDC61SLC35C10.628037303
CCDC61ABCC80.625451403
CCDC61SLC22A310.618287403
CCDC61IL17RC0.615005403
CCDC61C1orf610.611138403
CCDC61C3orf360.60887403

For details and further investigation, click here