| Full name: coiled-coil domain containing 96 | Alias Symbol: FLJ90575 | ||
| Type: protein-coding gene | Cytoband: 4p16.1 | ||
| Entrez ID: 257236 | HGNC ID: HGNC:26900 | Ensembl Gene: ENSG00000173013 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of CCDC96:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CCDC96 | 257236 | 238682_at | 0.0435 | 0.9286 | |
| GSE26886 | CCDC96 | 257236 | 238682_at | -0.6253 | 0.0047 | |
| GSE45670 | CCDC96 | 257236 | 238682_at | -0.0462 | 0.8275 | |
| GSE53622 | CCDC96 | 257236 | 52872 | -0.3814 | 0.0000 | |
| GSE53624 | CCDC96 | 257236 | 52872 | -0.5029 | 0.0000 | |
| GSE63941 | CCDC96 | 257236 | 238682_at | -0.8649 | 0.0048 | |
| GSE77861 | CCDC96 | 257236 | 238682_at | -0.1134 | 0.3902 | |
| GSE97050 | CCDC96 | 257236 | A_32_P69930 | -0.0426 | 0.8634 | |
| SRP064894 | CCDC96 | 257236 | RNAseq | -0.3438 | 0.2645 | |
| SRP133303 | CCDC96 | 257236 | RNAseq | -0.3636 | 0.1890 | |
| SRP159526 | CCDC96 | 257236 | RNAseq | -0.7747 | 0.0635 | |
| SRP219564 | CCDC96 | 257236 | RNAseq | -0.8629 | 0.0368 | |
| TCGA | CCDC96 | 257236 | RNAseq | -0.3645 | 0.0075 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CCDC96 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CCDC96:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CCDC96 | 257236 | 0 | 18 | 12 | |
| GSE20123 | CCDC96 | 257236 | 0 | 18 | 12 | |
| GSE43470 | CCDC96 | 257236 | 0 | 17 | 26 | |
| GSE46452 | CCDC96 | 257236 | 1 | 36 | 22 | |
| GSE47630 | CCDC96 | 257236 | 1 | 19 | 20 | |
| GSE54993 | CCDC96 | 257236 | 10 | 0 | 60 | |
| GSE54994 | CCDC96 | 257236 | 3 | 12 | 38 | |
| GSE60625 | CCDC96 | 257236 | 0 | 0 | 11 | |
| GSE74703 | CCDC96 | 257236 | 0 | 13 | 23 | |
| GSE74704 | CCDC96 | 257236 | 0 | 10 | 10 | |
| TCGA | CCDC96 | 257236 | 7 | 48 | 41 |
Total number of gains: 22; Total number of losses: 191; Total Number of normals: 275.
Somatic mutations of CCDC96:
Generating mutation plots.
Highly correlated genes for CCDC96:
Showing top 20/77 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CCDC96 | LARP4B | 0.746456 | 3 | 0 | 3 |
| CCDC96 | CDK15 | 0.701253 | 3 | 0 | 3 |
| CCDC96 | ARHGAP23 | 0.683043 | 3 | 0 | 3 |
| CCDC96 | NUDT16L1 | 0.680437 | 4 | 0 | 4 |
| CCDC96 | SUDS3 | 0.673782 | 3 | 0 | 3 |
| CCDC96 | CTAGE1 | 0.673493 | 3 | 0 | 3 |
| CCDC96 | ZNF621 | 0.662565 | 3 | 0 | 3 |
| CCDC96 | NOL4 | 0.659562 | 3 | 0 | 3 |
| CCDC96 | PABPC1 | 0.657732 | 3 | 0 | 3 |
| CCDC96 | ZNF682 | 0.642755 | 5 | 0 | 4 |
| CCDC96 | TBKBP1 | 0.625504 | 3 | 0 | 3 |
| CCDC96 | PCYT2 | 0.612897 | 4 | 0 | 4 |
| CCDC96 | LINC01111 | 0.610759 | 3 | 0 | 3 |
| CCDC96 | CCNB3 | 0.605822 | 3 | 0 | 3 |
| CCDC96 | NDUFB2-AS1 | 0.603828 | 3 | 0 | 3 |
| CCDC96 | PGAP3 | 0.600223 | 4 | 0 | 4 |
| CCDC96 | SHROOM2 | 0.596858 | 4 | 0 | 4 |
| CCDC96 | NCKAP5 | 0.592411 | 5 | 0 | 3 |
| CCDC96 | CNDP2 | 0.58904 | 4 | 0 | 3 |
| CCDC96 | SNIP1 | 0.586832 | 3 | 0 | 3 |
For details and further investigation, click here
