| Full name: shroom family member 2 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: Xp22.2 | ||
| Entrez ID: 357 | HGNC ID: HGNC:630 | Ensembl Gene: ENSG00000146950 | OMIM ID: 300103 |
| Drug and gene relationship at DGIdb | |||
SHROOM2 involved pathways:
| KEGG pathway | Description | View |
|---|---|---|
| hsa04530 | Tight junction |
Expression of SHROOM2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SHROOM2 | 357 | 204967_at | 0.5712 | 0.5098 | |
| GSE20347 | SHROOM2 | 357 | 204967_at | -0.4539 | 0.0290 | |
| GSE23400 | SHROOM2 | 357 | 204967_at | -0.1748 | 0.0121 | |
| GSE26886 | SHROOM2 | 357 | 204967_at | -0.7199 | 0.0016 | |
| GSE29001 | SHROOM2 | 357 | 204967_at | -0.2129 | 0.4650 | |
| GSE38129 | SHROOM2 | 357 | 204967_at | -0.0547 | 0.8332 | |
| GSE45670 | SHROOM2 | 357 | 204967_at | 0.5144 | 0.0176 | |
| GSE53622 | SHROOM2 | 357 | 28123 | -0.0655 | 0.7605 | |
| GSE53624 | SHROOM2 | 357 | 28123 | -0.2362 | 0.0591 | |
| GSE63941 | SHROOM2 | 357 | 204967_at | 0.5424 | 0.5703 | |
| GSE77861 | SHROOM2 | 357 | 204967_at | -0.2633 | 0.4872 | |
| GSE97050 | SHROOM2 | 357 | A_23_P217755 | 0.0966 | 0.7191 | |
| SRP007169 | SHROOM2 | 357 | RNAseq | 0.1447 | 0.7961 | |
| SRP008496 | SHROOM2 | 357 | RNAseq | -0.3686 | 0.3565 | |
| SRP064894 | SHROOM2 | 357 | RNAseq | -0.0545 | 0.8617 | |
| SRP133303 | SHROOM2 | 357 | RNAseq | 0.4167 | 0.1927 | |
| SRP159526 | SHROOM2 | 357 | RNAseq | 0.2826 | 0.4277 | |
| SRP193095 | SHROOM2 | 357 | RNAseq | -0.1489 | 0.5952 | |
| SRP219564 | SHROOM2 | 357 | RNAseq | 0.4995 | 0.5239 | |
| TCGA | SHROOM2 | 357 | RNAseq | 0.2460 | 0.0139 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SHROOM2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SHROOM2:
No record found for this gene.
Somatic mutations of SHROOM2:
Generating mutation plots.
Highly correlated genes for SHROOM2:
Showing top 20/256 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SHROOM2 | FAM83H | 0.717607 | 3 | 0 | 3 |
| SHROOM2 | MAL2 | 0.704521 | 4 | 0 | 4 |
| SHROOM2 | PRDM2 | 0.694412 | 3 | 0 | 3 |
| SHROOM2 | MTCH2 | 0.678738 | 3 | 0 | 3 |
| SHROOM2 | AGPAT3 | 0.673108 | 4 | 0 | 3 |
| SHROOM2 | RIOK3 | 0.637467 | 4 | 0 | 4 |
| SHROOM2 | PDP2 | 0.632374 | 3 | 0 | 3 |
| SHROOM2 | RNPEP | 0.628677 | 6 | 0 | 5 |
| SHROOM2 | USP46 | 0.61868 | 4 | 0 | 3 |
| SHROOM2 | CLEC16A | 0.618672 | 3 | 0 | 3 |
| SHROOM2 | BCO2 | 0.61736 | 3 | 0 | 3 |
| SHROOM2 | AP2S1 | 0.616165 | 4 | 0 | 4 |
| SHROOM2 | IDH1 | 0.60971 | 7 | 0 | 6 |
| SHROOM2 | HMGCR | 0.607091 | 6 | 0 | 5 |
| SHROOM2 | PTBP3 | 0.606693 | 4 | 0 | 3 |
| SHROOM2 | PKP1 | 0.602759 | 6 | 0 | 5 |
| SHROOM2 | YTHDF2 | 0.601151 | 4 | 0 | 3 |
| SHROOM2 | DMKN | 0.600407 | 3 | 0 | 3 |
| SHROOM2 | DSC2 | 0.599629 | 6 | 0 | 5 |
| SHROOM2 | EDARADD | 0.598697 | 3 | 0 | 3 |
For details and further investigation, click here
