| Full name: checkpoint with forkhead and ring finger domains | Alias Symbol: FLJ10796|RNF196 | ||
| Type: protein-coding gene | Cytoband: 12q24.33 | ||
| Entrez ID: 55743 | HGNC ID: HGNC:20455 | Ensembl Gene: ENSG00000072609 | OMIM ID: 605209 |
Expression of CHFR:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CHFR | 55743 | 218803_at | -0.0942 | 0.9245 | |
| GSE20347 | CHFR | 55743 | 218803_at | -1.2847 | 0.0001 | |
| GSE23400 | CHFR | 55743 | 218803_at | -0.4764 | 0.0000 | |
| GSE26886 | CHFR | 55743 | 218803_at | -0.3739 | 0.1530 | |
| GSE29001 | CHFR | 55743 | 218803_at | -1.0450 | 0.0110 | |
| GSE38129 | CHFR | 55743 | 218803_at | -1.0478 | 0.0000 | |
| GSE45670 | CHFR | 55743 | 218803_at | -0.2289 | 0.4417 | |
| GSE53622 | CHFR | 55743 | 18787 | -0.7544 | 0.0000 | |
| GSE53624 | CHFR | 55743 | 18787 | -0.7713 | 0.0000 | |
| GSE63941 | CHFR | 55743 | 223931_s_at | -0.5661 | 0.5515 | |
| GSE77861 | CHFR | 55743 | 218803_at | -0.4140 | 0.3855 | |
| GSE97050 | CHFR | 55743 | A_23_P344037 | -0.0671 | 0.8948 | |
| SRP007169 | CHFR | 55743 | RNAseq | -1.5798 | 0.0002 | |
| SRP008496 | CHFR | 55743 | RNAseq | -1.5633 | 0.0001 | |
| SRP064894 | CHFR | 55743 | RNAseq | -0.5527 | 0.0038 | |
| SRP133303 | CHFR | 55743 | RNAseq | -0.7577 | 0.0016 | |
| SRP159526 | CHFR | 55743 | RNAseq | -1.0475 | 0.0010 | |
| SRP193095 | CHFR | 55743 | RNAseq | -0.3562 | 0.0519 | |
| SRP219564 | CHFR | 55743 | RNAseq | -0.1898 | 0.4137 | |
| TCGA | CHFR | 55743 | RNAseq | -0.1581 | 0.1612 |
Upregulated datasets: 0; Downregulated datasets: 6.
Survival by CHFR expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CHFR:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CHFR | 55743 | 4 | 5 | 21 | |
| GSE20123 | CHFR | 55743 | 4 | 5 | 21 | |
| GSE43470 | CHFR | 55743 | 3 | 3 | 37 | |
| GSE46452 | CHFR | 55743 | 8 | 3 | 48 | |
| GSE47630 | CHFR | 55743 | 9 | 3 | 28 | |
| GSE54993 | CHFR | 55743 | 0 | 6 | 64 | |
| GSE54994 | CHFR | 55743 | 4 | 8 | 41 | |
| GSE60625 | CHFR | 55743 | 1 | 0 | 10 | |
| GSE74703 | CHFR | 55743 | 2 | 3 | 31 | |
| GSE74704 | CHFR | 55743 | 2 | 3 | 15 | |
| TCGA | CHFR | 55743 | 21 | 15 | 60 |
Total number of gains: 58; Total number of losses: 54; Total Number of normals: 376.
Somatic mutations of CHFR:
Generating mutation plots.
Highly correlated genes for CHFR:
Showing top 20/128 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CHFR | CPTP | 0.625451 | 5 | 0 | 5 |
| CHFR | NAT1 | 0.606937 | 3 | 0 | 3 |
| CHFR | SNORD89 | 0.602972 | 4 | 0 | 3 |
| CHFR | ZNF675 | 0.595817 | 4 | 0 | 3 |
| CHFR | ZSWIM8 | 0.590819 | 6 | 0 | 6 |
| CHFR | HES2 | 0.58473 | 4 | 0 | 3 |
| CHFR | GPR27 | 0.578092 | 5 | 0 | 4 |
| CHFR | RIPK1 | 0.576435 | 7 | 0 | 5 |
| CHFR | ACTR8 | 0.576384 | 3 | 0 | 3 |
| CHFR | B3GALT4 | 0.575151 | 5 | 0 | 5 |
| CHFR | ETHE1 | 0.57478 | 7 | 0 | 5 |
| CHFR | CC2D1A | 0.56866 | 6 | 0 | 3 |
| CHFR | ZNF682 | 0.567627 | 6 | 0 | 4 |
| CHFR | VDR | 0.561863 | 3 | 0 | 3 |
| CHFR | PLIN3 | 0.561141 | 6 | 0 | 6 |
| CHFR | POLR3B | 0.559854 | 7 | 0 | 4 |
| CHFR | ARSA | 0.559815 | 4 | 0 | 3 |
| CHFR | SERPINB6 | 0.558141 | 7 | 0 | 5 |
| CHFR | MAPKAPK3 | 0.557245 | 8 | 0 | 5 |
| CHFR | SCAP | 0.555786 | 6 | 0 | 4 |
For details and further investigation, click here
