| Full name: carbohydrate sulfotransferase 6 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 16q23.1 | ||
| Entrez ID: 4166 | HGNC ID: HGNC:6938 | Ensembl Gene: ENSG00000183196 | OMIM ID: 605294 |
| Drug and gene relationship at DGIdb | |||
Expression of CHST6:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CHST6 | 4166 | 223786_at | -0.6523 | 0.2146 | |
| GSE26886 | CHST6 | 4166 | 223786_at | 0.0048 | 0.9834 | |
| GSE45670 | CHST6 | 4166 | 223786_at | -0.1155 | 0.7954 | |
| GSE53622 | CHST6 | 4166 | 30251 | -0.0102 | 0.8769 | |
| GSE53624 | CHST6 | 4166 | 30251 | -0.1442 | 0.0512 | |
| GSE63941 | CHST6 | 4166 | 223786_at | 0.6380 | 0.1546 | |
| GSE77861 | CHST6 | 4166 | 223786_at | -0.0692 | 0.6405 | |
| GSE97050 | CHST6 | 4166 | A_23_P106922 | -0.5969 | 0.2250 | |
| SRP007169 | CHST6 | 4166 | RNAseq | 1.4318 | 0.0706 | |
| SRP064894 | CHST6 | 4166 | RNAseq | -0.8192 | 0.0318 | |
| SRP133303 | CHST6 | 4166 | RNAseq | 0.0124 | 0.9569 | |
| SRP159526 | CHST6 | 4166 | RNAseq | 0.1955 | 0.7297 | |
| SRP193095 | CHST6 | 4166 | RNAseq | 0.2179 | 0.1934 | |
| SRP219564 | CHST6 | 4166 | RNAseq | -0.0449 | 0.9224 | |
| TCGA | CHST6 | 4166 | RNAseq | 0.5146 | 0.0200 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CHST6 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CHST6:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CHST6 | 4166 | 5 | 0 | 25 | |
| GSE20123 | CHST6 | 4166 | 5 | 0 | 25 | |
| GSE43470 | CHST6 | 4166 | 2 | 7 | 34 | |
| GSE46452 | CHST6 | 4166 | 37 | 2 | 20 | |
| GSE47630 | CHST6 | 4166 | 11 | 8 | 21 | |
| GSE54993 | CHST6 | 4166 | 2 | 4 | 64 | |
| GSE54994 | CHST6 | 4166 | 8 | 10 | 35 | |
| GSE60625 | CHST6 | 4166 | 4 | 0 | 7 | |
| GSE74703 | CHST6 | 4166 | 2 | 5 | 29 | |
| GSE74704 | CHST6 | 4166 | 2 | 0 | 18 | |
| TCGA | CHST6 | 4166 | 24 | 15 | 57 |
Total number of gains: 102; Total number of losses: 51; Total Number of normals: 335.
Somatic mutations of CHST6:
Generating mutation plots.
Highly correlated genes for CHST6:
Showing top 20/32 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CHST6 | RAB11FIP1 | 0.717016 | 3 | 0 | 3 |
| CHST6 | GLCE | 0.676408 | 3 | 0 | 3 |
| CHST6 | CD24 | 0.662394 | 3 | 0 | 3 |
| CHST6 | S100A10 | 0.639657 | 3 | 0 | 3 |
| CHST6 | CRISP3 | 0.634903 | 3 | 0 | 3 |
| CHST6 | TSPYL6 | 0.634042 | 3 | 0 | 3 |
| CHST6 | PRSS8 | 0.63096 | 3 | 0 | 3 |
| CHST6 | SULT2B1 | 0.612143 | 3 | 0 | 3 |
| CHST6 | EPS8L1 | 0.60707 | 3 | 0 | 3 |
| CHST6 | KRT74 | 0.597787 | 4 | 0 | 3 |
| CHST6 | EPS8L2 | 0.594868 | 3 | 0 | 3 |
| CHST6 | SCNN1A | 0.591221 | 4 | 0 | 3 |
| CHST6 | MYBPC3 | 0.589815 | 3 | 0 | 3 |
| CHST6 | TTC23L | 0.586677 | 4 | 0 | 4 |
| CHST6 | INPP5J | 0.582401 | 3 | 0 | 3 |
| CHST6 | ATPAF2 | 0.581669 | 3 | 0 | 3 |
| CHST6 | RBBP8NL | 0.572953 | 4 | 0 | 3 |
| CHST6 | BCOR | 0.572248 | 4 | 0 | 3 |
| CHST6 | CRTC1 | 0.567142 | 3 | 0 | 3 |
| CHST6 | ENO1-AS1 | 0.561756 | 3 | 0 | 3 |
For details and further investigation, click here
