SCNN1A

 

Full name: sodium channel epithelial 1 alpha subunit Alias Symbol: ENaCalpha
Type: protein-coding gene Cytoband: 12p13
Entrez ID: 6337 HGNC ID: HGNC:10599 Ensembl Gene: ENSG00000111319 OMIM ID: 600228
Drug and gene relationship at DGIdb

 

SCNN1A involved pathways:

KEGG pathway Description View
hsa04960Aldosterone-regulated sodium reabsorption

 

Expression of SCNN1A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SCNN1A 6337 203453_at -2.1312 0.2366
GSE20347 SCNN1A 6337 203453_at -2.1554 0.0000
GSE23400 SCNN1A 6337 203453_at -1.9079 0.0000
GSE26886 SCNN1A 6337 203453_at -2.0283 0.0007
GSE29001 SCNN1A 6337 203453_at -2.3174 0.0029
GSE38129 SCNN1A 6337 203453_at -1.2690 0.0165
GSE45670 SCNN1A 6337 203453_at -0.9786 0.0662
GSE53622 SCNN1A 6337 37787 -2.1505 0.0000
GSE53624 SCNN1A 6337 37787 -2.1705 0.0000
GSE63941 SCNN1A 6337 203453_at 5.0565 0.0031
GSE77861 SCNN1A 6337 203453_at -1.2960 0.0211
GSE97050 SCNN1A 6337 A_23_P128323 0.1388 0.8893
SRP007169 SCNN1A 6337 RNAseq -2.0678 0.0000
SRP008496 SCNN1A 6337 RNAseq -2.4258 0.0000
SRP064894 SCNN1A 6337 RNAseq -2.3249 0.0000
SRP133303 SCNN1A 6337 RNAseq -1.2858 0.0333
SRP159526 SCNN1A 6337 RNAseq -2.0452 0.0172
SRP193095 SCNN1A 6337 RNAseq -1.7629 0.0000
SRP219564 SCNN1A 6337 RNAseq -1.9256 0.0569
TCGA SCNN1A 6337 RNAseq -0.2445 0.2608

Upregulated datasets: 1; Downregulated datasets: 14.  


 

Survival by SCNN1A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SCNN1A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SCNN1A 6337 9 3 18
GSE20123 SCNN1A 6337 9 3 18
GSE43470 SCNN1A 6337 8 3 32
GSE46452 SCNN1A 6337 10 1 48
GSE47630 SCNN1A 6337 12 2 26
GSE54993 SCNN1A 6337 1 10 59
GSE54994 SCNN1A 6337 10 2 41
GSE60625 SCNN1A 6337 0 1 10
GSE74703 SCNN1A 6337 7 2 27
GSE74704 SCNN1A 6337 5 2 13
TCGA SCNN1A 6337 40 6 50

Total number of gains: 111; Total number of losses: 35; Total Number of normals: 342.  


 

Somatic mutations of SCNN1A:

 

Generating mutation plots.

 

Highly correlated genes for SCNN1A:

 

Showing top 20/1003 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SCNN1AELF30.78597913013
SCNN1AERBB30.77787212012
SCNN1ATMPRSS11A0.775215303
SCNN1ANCCRP10.772128303
SCNN1AMGST20.77082710010
SCNN1ANEBL0.76711913012
SCNN1APPL0.76024912012
SCNN1ACEACAM70.75811311011
SCNN1ACLDN40.75632510010
SCNN1AEVPL0.75354912012
SCNN1AKLK130.75175911010
SCNN1ACEACAM50.75165813012
SCNN1AMAL20.746083707
SCNN1ASCNN1B0.74578711011
SCNN1AULK30.7442606
SCNN1AFAM214A0.74283606
SCNN1ALIPH0.739723808
SCNN1AEPHX30.73751911011
SCNN1AMUC200.737082807
SCNN1AUPK3B0.737035303

For details and further investigation, click here