| Full name: CAP-Gly domain containing linker protein family member 4 | Alias Symbol: FLJ21069 | ||
| Type: protein-coding gene | Cytoband: 2p23.2 | ||
| Entrez ID: 79745 | HGNC ID: HGNC:26108 | Ensembl Gene: ENSG00000115295 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CLIP4:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CLIP4 | 79745 | 226425_at | -0.8038 | 0.3168 | |
| GSE20347 | CLIP4 | 79745 | 219944_at | 0.1305 | 0.6069 | |
| GSE23400 | CLIP4 | 79745 | 219944_at | 0.0942 | 0.3886 | |
| GSE26886 | CLIP4 | 79745 | 226425_at | -0.4497 | 0.2434 | |
| GSE29001 | CLIP4 | 79745 | 219944_at | -0.0860 | 0.7599 | |
| GSE38129 | CLIP4 | 79745 | 219944_at | 0.3613 | 0.1870 | |
| GSE45670 | CLIP4 | 79745 | 226425_at | -0.3143 | 0.1124 | |
| GSE53622 | CLIP4 | 79745 | 48747 | -0.0484 | 0.7107 | |
| GSE53624 | CLIP4 | 79745 | 121656 | -0.8148 | 0.0000 | |
| GSE63941 | CLIP4 | 79745 | 226425_at | -1.6524 | 0.0570 | |
| GSE77861 | CLIP4 | 79745 | 226425_at | -0.1619 | 0.6651 | |
| GSE97050 | CLIP4 | 79745 | A_23_P209232 | -1.0791 | 0.0555 | |
| SRP007169 | CLIP4 | 79745 | RNAseq | -0.3774 | 0.2642 | |
| SRP008496 | CLIP4 | 79745 | RNAseq | -0.0859 | 0.7627 | |
| SRP064894 | CLIP4 | 79745 | RNAseq | -0.4615 | 0.1281 | |
| SRP133303 | CLIP4 | 79745 | RNAseq | -0.3981 | 0.0566 | |
| SRP159526 | CLIP4 | 79745 | RNAseq | -0.0223 | 0.9593 | |
| SRP193095 | CLIP4 | 79745 | RNAseq | 0.1171 | 0.6420 | |
| SRP219564 | CLIP4 | 79745 | RNAseq | -0.8653 | 0.0030 | |
| TCGA | CLIP4 | 79745 | RNAseq | 0.2710 | 0.0013 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CLIP4 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CLIP4:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CLIP4 | 79745 | 11 | 2 | 17 | |
| GSE20123 | CLIP4 | 79745 | 11 | 2 | 17 | |
| GSE43470 | CLIP4 | 79745 | 3 | 1 | 39 | |
| GSE46452 | CLIP4 | 79745 | 2 | 4 | 53 | |
| GSE47630 | CLIP4 | 79745 | 8 | 0 | 32 | |
| GSE54993 | CLIP4 | 79745 | 0 | 6 | 64 | |
| GSE54994 | CLIP4 | 79745 | 10 | 0 | 43 | |
| GSE60625 | CLIP4 | 79745 | 0 | 3 | 8 | |
| GSE74703 | CLIP4 | 79745 | 3 | 0 | 33 | |
| GSE74704 | CLIP4 | 79745 | 9 | 1 | 10 | |
| TCGA | CLIP4 | 79745 | 36 | 2 | 58 |
Total number of gains: 93; Total number of losses: 21; Total Number of normals: 374.
Somatic mutations of CLIP4:
Generating mutation plots.
Highly correlated genes for CLIP4:
Showing top 20/335 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CLIP4 | MTA3 | 0.796335 | 3 | 0 | 3 |
| CLIP4 | PPP3CC | 0.738621 | 3 | 0 | 3 |
| CLIP4 | PHYHIPL | 0.73688 | 3 | 0 | 3 |
| CLIP4 | UBR2 | 0.735961 | 3 | 0 | 3 |
| CLIP4 | NDUFV2 | 0.733799 | 3 | 0 | 3 |
| CLIP4 | AKIP1 | 0.724922 | 4 | 0 | 4 |
| CLIP4 | UBE4A | 0.723085 | 3 | 0 | 3 |
| CLIP4 | ANKRD13C | 0.719203 | 3 | 0 | 3 |
| CLIP4 | TUBB4B | 0.717396 | 4 | 0 | 4 |
| CLIP4 | WDR36 | 0.71344 | 3 | 0 | 3 |
| CLIP4 | CUL4B | 0.707987 | 3 | 0 | 3 |
| CLIP4 | PAAF1 | 0.69941 | 4 | 0 | 3 |
| CLIP4 | USP47 | 0.699298 | 3 | 0 | 3 |
| CLIP4 | RNF111 | 0.695606 | 4 | 0 | 3 |
| CLIP4 | ZNF441 | 0.69406 | 3 | 0 | 3 |
| CLIP4 | VPS37A | 0.690718 | 3 | 0 | 3 |
| CLIP4 | PDLIM2 | 0.690382 | 3 | 0 | 3 |
| CLIP4 | MRPL19 | 0.682152 | 3 | 0 | 3 |
| CLIP4 | NAPG | 0.677726 | 6 | 0 | 5 |
| CLIP4 | LYRM7 | 0.673968 | 5 | 0 | 4 |
For details and further investigation, click here
