| Full name: COL18A1 antisense RNA 1 | Alias Symbol: PRED80 | ||
| Type: non-coding RNA | Cytoband: 21q22.3 | ||
| Entrez ID: 378832 | HGNC ID: HGNC:23132 | Ensembl Gene: ENSG00000183535 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of COL18A1-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | COL18A1-AS1 | 378832 | 1564017_at | -0.1188 | 0.6252 | |
| GSE26886 | COL18A1-AS1 | 378832 | 1564017_at | 0.2791 | 0.0156 | |
| GSE45670 | COL18A1-AS1 | 378832 | 1564017_at | 0.0077 | 0.9151 | |
| GSE53622 | COL18A1-AS1 | 378832 | 152434 | -0.2439 | 0.0762 | |
| GSE53624 | COL18A1-AS1 | 378832 | 152434 | -0.0625 | 0.5004 | |
| GSE63941 | COL18A1-AS1 | 378832 | 1564017_at | -0.1152 | 0.4304 | |
| GSE77861 | COL18A1-AS1 | 378832 | 1564017_at | -0.0718 | 0.3384 | |
| SRP133303 | COL18A1-AS1 | 378832 | RNAseq | -0.2831 | 0.3533 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by COL18A1-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of COL18A1-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | COL18A1-AS1 | 378832 | 2 | 8 | 20 | |
| GSE20123 | COL18A1-AS1 | 378832 | 2 | 8 | 20 | |
| GSE43470 | COL18A1-AS1 | 378832 | 0 | 14 | 29 | |
| GSE46452 | COL18A1-AS1 | 378832 | 1 | 21 | 37 | |
| GSE47630 | COL18A1-AS1 | 378832 | 6 | 17 | 17 | |
| GSE54993 | COL18A1-AS1 | 378832 | 8 | 1 | 61 | |
| GSE54994 | COL18A1-AS1 | 378832 | 5 | 8 | 40 | |
| GSE60625 | COL18A1-AS1 | 378832 | 0 | 0 | 11 | |
| GSE74703 | COL18A1-AS1 | 378832 | 0 | 10 | 26 | |
| GSE74704 | COL18A1-AS1 | 378832 | 1 | 4 | 15 |
Total number of gains: 25; Total number of losses: 91; Total Number of normals: 276.
Somatic mutations of COL18A1-AS1:
Generating mutation plots.
Highly correlated genes for COL18A1-AS1:
Showing all 16 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| COL18A1-AS1 | CCL21 | 0.713481 | 3 | 0 | 3 |
| COL18A1-AS1 | CD79A | 0.693894 | 3 | 0 | 3 |
| COL18A1-AS1 | SPATA25 | 0.634955 | 3 | 0 | 3 |
| COL18A1-AS1 | PTPRCAP | 0.62729 | 3 | 0 | 3 |
| COL18A1-AS1 | KLF9 | 0.614439 | 3 | 0 | 3 |
| COL18A1-AS1 | KCNK9 | 0.60977 | 3 | 0 | 3 |
| COL18A1-AS1 | DSCAML1 | 0.600452 | 4 | 0 | 3 |
| COL18A1-AS1 | SLC30A2 | 0.599508 | 3 | 0 | 3 |
| COL18A1-AS1 | EBF3 | 0.575409 | 3 | 0 | 3 |
| COL18A1-AS1 | PARD3B | 0.571912 | 4 | 0 | 3 |
| COL18A1-AS1 | IL4 | 0.569147 | 3 | 0 | 3 |
| COL18A1-AS1 | ELANE | 0.566094 | 4 | 0 | 3 |
| COL18A1-AS1 | NPR1 | 0.542373 | 3 | 0 | 3 |
| COL18A1-AS1 | CCDC57 | 0.541851 | 3 | 0 | 3 |
| COL18A1-AS1 | SCARNA17 | 0.521503 | 3 | 0 | 3 |
| COL18A1-AS1 | LRRC36 | 0.511865 | 3 | 0 | 3 |
For details and further investigation, click here
