SPATA25

 

Full name: spermatogenesis associated 25 Alias Symbol: dJ337O18.8|TSG23
Type: protein-coding gene Cytoband: 20q13.12
Entrez ID: 128497 HGNC ID: HGNC:16158 Ensembl Gene: ENSG00000149634 OMIM ID: 
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of SPATA25:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SPATA25 128497 1553752_at -0.1989 0.3211
GSE26886 SPATA25 128497 1553752_at 0.2444 0.0637
GSE45670 SPATA25 128497 1553752_at -0.0984 0.3171
GSE53622 SPATA25 128497 52639 0.3732 0.0000
GSE53624 SPATA25 128497 52639 0.4104 0.0000
GSE63941 SPATA25 128497 1553752_at 0.0328 0.8527
GSE77861 SPATA25 128497 1553752_at -0.2992 0.0478
SRP133303 SPATA25 128497 RNAseq -0.3507 0.2218
SRP159526 SPATA25 128497 RNAseq 0.3499 0.5444
SRP219564 SPATA25 128497 RNAseq -0.1482 0.7854

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by SPATA25 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of SPATA25:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SPATA25 128497 14 1 15
GSE20123 SPATA25 128497 14 1 15
GSE43470 SPATA25 128497 12 1 30
GSE46452 SPATA25 128497 29 0 30
GSE47630 SPATA25 128497 24 1 15
GSE54993 SPATA25 128497 0 17 53
GSE54994 SPATA25 128497 25 0 28
GSE60625 SPATA25 128497 0 0 11
GSE74703 SPATA25 128497 10 1 25
GSE74704 SPATA25 128497 10 0 10
TCGA SPATA25 128497 46 3 47

Total number of gains: 184; Total number of losses: 25; Total Number of normals: 279.  


 

Somatic mutations of SPATA25:

 

Generating mutation plots.

 

Highly correlated genes for SPATA25:

 

Showing top 20/84 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SPATA25HTR1E0.686176303
SPATA25INSL30.67656303
SPATA25APOB0.667682303
SPATA25DNAI20.662953303
SPATA25MAT1A0.653265303
SPATA25CLDND20.651378303
SPATA25ITIH40.646485303
SPATA25MUC20.645461303
SPATA25CCDC360.635251303
SPATA25COL18A1-AS10.634955303
SPATA25TMEM2320.633148303
SPATA25PRM20.63121303
SPATA25HMCN20.629056403
SPATA25GBX20.627005303
SPATA25CCDC1160.625098303
SPATA25ST3GAL30.624639303
SPATA25ABCC80.624571303
SPATA25ASPDH0.620697303
SPATA25CDC42BPG0.619224303
SPATA25ISOC20.617481303

For details and further investigation, click here