| Full name: chondroitin sulfate proteoglycan 5 | Alias Symbol: NGC | ||
| Type: protein-coding gene | Cytoband: 3p21.31 | ||
| Entrez ID: 10675 | HGNC ID: HGNC:2467 | Ensembl Gene: ENSG00000114646 | OMIM ID: 606775 |
| Drug and gene relationship at DGIdb | |||
Expression of CSPG5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CSPG5 | 10675 | 205344_at | -0.0612 | 0.7745 | |
| GSE20347 | CSPG5 | 10675 | 205344_at | -0.1511 | 0.1275 | |
| GSE23400 | CSPG5 | 10675 | 205344_at | -0.2023 | 0.0000 | |
| GSE26886 | CSPG5 | 10675 | 205344_at | -0.1523 | 0.2078 | |
| GSE29001 | CSPG5 | 10675 | 39966_at | 0.5613 | 0.1547 | |
| GSE38129 | CSPG5 | 10675 | 205344_at | -0.2433 | 0.0022 | |
| GSE45670 | CSPG5 | 10675 | 205344_at | -0.0705 | 0.4989 | |
| GSE53622 | CSPG5 | 10675 | 5198 | 0.2494 | 0.1033 | |
| GSE53624 | CSPG5 | 10675 | 5198 | 0.7214 | 0.0000 | |
| GSE63941 | CSPG5 | 10675 | 205344_at | 0.4425 | 0.1739 | |
| GSE77861 | CSPG5 | 10675 | 205344_at | -0.1749 | 0.1124 | |
| GSE97050 | CSPG5 | A_21_P0000172 | -0.0421 | 0.9141 | ||
| SRP159526 | CSPG5 | 10675 | RNAseq | 1.1538 | 0.0502 | |
| SRP219564 | CSPG5 | 10675 | RNAseq | 0.1096 | 0.8678 | |
| TCGA | CSPG5 | 10675 | RNAseq | 0.6156 | 0.0373 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CSPG5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CSPG5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CSPG5 | 10675 | 0 | 18 | 12 | |
| GSE20123 | CSPG5 | 10675 | 0 | 19 | 11 | |
| GSE43470 | CSPG5 | 10675 | 0 | 19 | 24 | |
| GSE46452 | CSPG5 | 10675 | 2 | 17 | 40 | |
| GSE47630 | CSPG5 | 10675 | 2 | 23 | 15 | |
| GSE54993 | CSPG5 | 10675 | 6 | 2 | 62 | |
| GSE54994 | CSPG5 | 10675 | 0 | 36 | 17 | |
| GSE60625 | CSPG5 | 10675 | 5 | 0 | 6 | |
| GSE74703 | CSPG5 | 10675 | 0 | 15 | 21 | |
| GSE74704 | CSPG5 | 10675 | 0 | 12 | 8 | |
| TCGA | CSPG5 | 10675 | 1 | 75 | 20 |
Total number of gains: 16; Total number of losses: 236; Total Number of normals: 236.
Somatic mutations of CSPG5:
Generating mutation plots.
Highly correlated genes for CSPG5:
Showing top 20/449 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CSPG5 | SMPX | 0.702892 | 3 | 0 | 3 |
| CSPG5 | PHEX | 0.702781 | 3 | 0 | 3 |
| CSPG5 | CCDC36 | 0.701569 | 3 | 0 | 3 |
| CSPG5 | KCNK9 | 0.695441 | 3 | 0 | 3 |
| CSPG5 | SPAG6 | 0.663727 | 4 | 0 | 4 |
| CSPG5 | FAM76A | 0.653388 | 3 | 0 | 3 |
| CSPG5 | TMPRSS15 | 0.652462 | 4 | 0 | 4 |
| CSPG5 | ZNF804B | 0.651808 | 3 | 0 | 3 |
| CSPG5 | STAC2 | 0.651331 | 4 | 0 | 4 |
| CSPG5 | STAB2 | 0.645073 | 8 | 0 | 7 |
| CSPG5 | PRL | 0.642417 | 4 | 0 | 4 |
| CSPG5 | TBX10 | 0.6366 | 5 | 0 | 4 |
| CSPG5 | SPX | 0.633652 | 4 | 0 | 4 |
| CSPG5 | BRINP2 | 0.633396 | 4 | 0 | 3 |
| CSPG5 | DLGAP1 | 0.630886 | 6 | 0 | 6 |
| CSPG5 | ASMT | 0.628396 | 4 | 0 | 4 |
| CSPG5 | VIPR2 | 0.627395 | 7 | 0 | 7 |
| CSPG5 | EDA2R | 0.625458 | 5 | 0 | 4 |
| CSPG5 | PSG4 | 0.625327 | 5 | 0 | 3 |
| CSPG5 | HDAC11 | 0.617571 | 3 | 0 | 3 |
For details and further investigation, click here
