DCLRE1C

 

Full name: DNA cross-link repair 1C Alias Symbol: ARTEMIS|FLJ11360|SNM1C|A-SCID
Type: protein-coding gene Cytoband: 10p13
Entrez ID: 64421 HGNC ID: HGNC:17642 Ensembl Gene: ENSG00000152457 OMIM ID: 605988
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of DCLRE1C:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 DCLRE1C 64421 219678_x_at -0.1038 0.8593
GSE20347 DCLRE1C 64421 219678_x_at 0.2250 0.2370
GSE23400 DCLRE1C 64421 219678_x_at -0.0364 0.5848
GSE26886 DCLRE1C 64421 219678_x_at 0.3338 0.0953
GSE29001 DCLRE1C 64421 219678_x_at 0.0188 0.9559
GSE38129 DCLRE1C 64421 219678_x_at 0.0772 0.6801
GSE45670 DCLRE1C 64421 219678_x_at 0.0699 0.6172
GSE53622 DCLRE1C 64421 63255 -0.1920 0.0444
GSE53624 DCLRE1C 64421 63255 -0.3297 0.0000
GSE63941 DCLRE1C 64421 219678_x_at 0.0703 0.8635
GSE77861 DCLRE1C 64421 219678_x_at 0.1621 0.6478
GSE97050 DCLRE1C 64421 A_23_P86632 0.1440 0.7225
SRP007169 DCLRE1C 64421 RNAseq -0.2502 0.5119
SRP008496 DCLRE1C 64421 RNAseq -0.6438 0.0101
SRP064894 DCLRE1C 64421 RNAseq -0.2925 0.0596
SRP133303 DCLRE1C 64421 RNAseq -0.2547 0.0529
SRP159526 DCLRE1C 64421 RNAseq -1.0598 0.0000
SRP193095 DCLRE1C 64421 RNAseq -0.2818 0.0008
SRP219564 DCLRE1C 64421 RNAseq -0.8316 0.0427
TCGA DCLRE1C 64421 RNAseq 0.0952 0.1386

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by DCLRE1C expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of DCLRE1C:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 DCLRE1C 64421 3 8 19
GSE20123 DCLRE1C 64421 3 7 20
GSE43470 DCLRE1C 64421 3 5 35
GSE46452 DCLRE1C 64421 1 14 44
GSE47630 DCLRE1C 64421 5 15 20
GSE54993 DCLRE1C 64421 10 0 60
GSE54994 DCLRE1C 64421 4 9 40
GSE60625 DCLRE1C 64421 0 0 11
GSE74703 DCLRE1C 64421 2 3 31
GSE74704 DCLRE1C 64421 0 6 14
TCGA DCLRE1C 64421 20 25 51

Total number of gains: 51; Total number of losses: 92; Total Number of normals: 345.  


 

Somatic mutations of DCLRE1C:

 

Generating mutation plots.

 

Highly correlated genes for DCLRE1C:

 

Showing top 20/224 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DCLRE1CBIRC30.848946303
DCLRE1CHAUS20.797171909
DCLRE1CMAGI10.790483404
DCLRE1CALMS10.775238808
DCLRE1CSLC22A30.773199404
DCLRE1CSLC35E10.7632331009
DCLRE1CERGIC10.757948303
DCLRE1CPILRA0.753485303
DCLRE1CZNF6110.750447808
DCLRE1CLILRB10.749369303
DCLRE1CC9orf640.747666605
DCLRE1CRPL22L10.74717303
DCLRE1CGTF2H30.745308909
DCLRE1CZNF7210.741579908
DCLRE1CCMBL0.739673404
DCLRE1CFAM161B0.734721505
DCLRE1CPOLR1B0.734318806
DCLRE1CMCM80.732798303
DCLRE1CCCDC840.732167404
DCLRE1CKLHL290.730975303

For details and further investigation, click here