EDN3

 

Full name: endothelin 3 Alias Symbol: ET3
Type: protein-coding gene Cytoband: 20q13.32
Entrez ID: 1908 HGNC ID: HGNC:3178 Ensembl Gene: ENSG00000124205 OMIM ID: 131242
Drug and gene relationship at DGIdb

 

Expression of EDN3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EDN3 1908 208399_s_at -4.6325 0.0102
GSE20347 EDN3 1908 208399_s_at -1.7812 0.0000
GSE23400 EDN3 1908 208399_s_at -0.8031 0.0000
GSE26886 EDN3 1908 208399_s_at -2.3876 0.0004
GSE29001 EDN3 1908 208399_s_at -2.2760 0.0000
GSE38129 EDN3 1908 208399_s_at -1.7138 0.0000
GSE45670 EDN3 1908 208399_s_at -3.4816 0.0000
GSE53622 EDN3 1908 13875 -3.0305 0.0000
GSE53624 EDN3 1908 13875 -2.7058 0.0000
GSE63941 EDN3 1908 217154_s_at 0.1294 0.3972
GSE77861 EDN3 1908 208399_s_at -1.5563 0.0003
GSE97050 EDN3 1908 A_33_P3397288 -1.2109 0.1781
SRP007169 EDN3 1908 RNAseq -9.9922 0.0000
SRP064894 EDN3 1908 RNAseq -6.2603 0.0000
SRP133303 EDN3 1908 RNAseq -4.6093 0.0000
SRP159526 EDN3 1908 RNAseq -1.3478 0.3832
SRP193095 EDN3 1908 RNAseq -3.8234 0.0000
SRP219564 EDN3 1908 RNAseq -3.9364 0.0019
TCGA EDN3 1908 RNAseq -1.0554 0.2819

Upregulated datasets: 0; Downregulated datasets: 14.  


 

Survival by EDN3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EDN3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EDN3 1908 13 2 15
GSE20123 EDN3 1908 14 2 14
GSE43470 EDN3 1908 13 0 30
GSE46452 EDN3 1908 29 0 30
GSE47630 EDN3 1908 24 1 15
GSE54993 EDN3 1908 0 17 53
GSE54994 EDN3 1908 29 0 24
GSE60625 EDN3 1908 0 0 11
GSE74703 EDN3 1908 11 0 25
GSE74704 EDN3 1908 11 0 9
TCGA EDN3 1908 43 4 49

Total number of gains: 187; Total number of losses: 26; Total Number of normals: 275.  


 

Somatic mutations of EDN3:

 

Generating mutation plots.

 

Highly correlated genes for EDN3:

 

Showing top 20/1313 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EDN3MYZAP0.801733303
EDN3SLC6A10.77709110010
EDN3CTTNBP20.769444707
EDN3MAPT0.76064110010
EDN3KRT780.750745707
EDN3HCG220.748621606
EDN3UPK1A0.74801711011
EDN3MORN30.746946404
EDN3ZNF5360.746456404
EDN3VSIG20.745088707
EDN3UBL30.74180311011
EDN3SNORA680.741429404
EDN3NFIX0.740153505
EDN3ZNF6620.738943606
EDN3SUMF10.737631404
EDN3TFAP2B0.7367271009
EDN3SH3BGRL20.733867807
EDN3FAM219B0.732373404
EDN3PCBP1-AS10.729303505
EDN3FAM214A0.728722606

For details and further investigation, click here