| Full name: PCBP1 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 2p13.3 | ||
| Entrez ID: 400960 | HGNC ID: HGNC:42948 | Ensembl Gene: ENSG00000179818 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PCBP1-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PCBP1-AS1 | 400960 | 235482_at | -0.6078 | 0.1065 | |
| GSE26886 | PCBP1-AS1 | 400960 | 227969_at | -2.3646 | 0.0000 | |
| GSE45670 | PCBP1-AS1 | 400960 | 235482_at | -0.4964 | 0.0124 | |
| GSE53622 | PCBP1-AS1 | 400960 | 52529 | 0.2105 | 0.0842 | |
| GSE53624 | PCBP1-AS1 | 400960 | 122114 | -2.4260 | 0.0000 | |
| GSE63941 | PCBP1-AS1 | 400960 | 235482_at | -0.1640 | 0.7504 | |
| GSE77861 | PCBP1-AS1 | 400960 | 227969_at | -0.9417 | 0.0013 | |
| SRP007169 | PCBP1-AS1 | 400960 | RNAseq | -2.8595 | 0.0000 | |
| SRP064894 | PCBP1-AS1 | 400960 | RNAseq | -1.4009 | 0.0000 | |
| SRP133303 | PCBP1-AS1 | 400960 | RNAseq | -0.5590 | 0.0135 | |
| SRP159526 | PCBP1-AS1 | 400960 | RNAseq | -0.7581 | 0.0667 | |
| SRP193095 | PCBP1-AS1 | 400960 | RNAseq | -0.8113 | 0.0000 | |
| SRP219564 | PCBP1-AS1 | 400960 | RNAseq | -1.2680 | 0.0027 |
Upregulated datasets: 0; Downregulated datasets: 5.
Survival by PCBP1-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of PCBP1-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PCBP1-AS1 | 400960 | 11 | 1 | 18 | |
| GSE20123 | PCBP1-AS1 | 400960 | 11 | 1 | 18 | |
| GSE43470 | PCBP1-AS1 | 400960 | 3 | 0 | 40 | |
| GSE46452 | PCBP1-AS1 | 400960 | 2 | 3 | 54 | |
| GSE47630 | PCBP1-AS1 | 400960 | 7 | 0 | 33 | |
| GSE54993 | PCBP1-AS1 | 400960 | 0 | 6 | 64 | |
| GSE54994 | PCBP1-AS1 | 400960 | 11 | 2 | 40 | |
| GSE60625 | PCBP1-AS1 | 400960 | 0 | 3 | 8 | |
| GSE74703 | PCBP1-AS1 | 400960 | 3 | 0 | 33 | |
| GSE74704 | PCBP1-AS1 | 400960 | 9 | 1 | 10 |
Total number of gains: 57; Total number of losses: 17; Total Number of normals: 318.
Somatic mutations of PCBP1-AS1:
Generating mutation plots.
Highly correlated genes for PCBP1-AS1:
Showing top 20/718 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PCBP1-AS1 | CAPN14 | 0.844359 | 3 | 0 | 3 |
| PCBP1-AS1 | GRPEL2 | 0.841297 | 3 | 0 | 3 |
| PCBP1-AS1 | KLB | 0.833912 | 3 | 0 | 3 |
| PCBP1-AS1 | PAX9 | 0.82229 | 3 | 0 | 3 |
| PCBP1-AS1 | MIEF2 | 0.821671 | 3 | 0 | 3 |
| PCBP1-AS1 | ACOX1 | 0.819354 | 3 | 0 | 3 |
| PCBP1-AS1 | ACOX3 | 0.818227 | 3 | 0 | 3 |
| PCBP1-AS1 | TMPRSS2 | 0.816228 | 3 | 0 | 3 |
| PCBP1-AS1 | SCNN1B | 0.815796 | 4 | 0 | 4 |
| PCBP1-AS1 | WDR26 | 0.815274 | 3 | 0 | 3 |
| PCBP1-AS1 | CYP4B1 | 0.813008 | 4 | 0 | 4 |
| PCBP1-AS1 | ST6GALNAC1 | 0.811056 | 3 | 0 | 3 |
| PCBP1-AS1 | PSCA | 0.805684 | 3 | 0 | 3 |
| PCBP1-AS1 | GPT2 | 0.802034 | 3 | 0 | 3 |
| PCBP1-AS1 | ABLIM3 | 0.80096 | 4 | 0 | 4 |
| PCBP1-AS1 | STRN | 0.798815 | 3 | 0 | 3 |
| PCBP1-AS1 | RASSF5 | 0.797625 | 3 | 0 | 3 |
| PCBP1-AS1 | CITED2 | 0.796472 | 4 | 0 | 4 |
| PCBP1-AS1 | SIM2 | 0.796007 | 4 | 0 | 4 |
| PCBP1-AS1 | USP6NL | 0.794874 | 3 | 0 | 3 |
For details and further investigation, click here
