EGFLAM

 

Full name: EGF like, fibronectin type III and laminin G domains Alias Symbol: FLJ39155|AGRINL|AGRNL|PIKA
Type: protein-coding gene Cytoband: 5p13.2-p13.1
Entrez ID: 133584 HGNC ID: HGNC:26810 Ensembl Gene: ENSG00000164318 OMIM ID: 617683
Drug and gene relationship at DGIdb

 

Expression of EGFLAM:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EGFLAM 133584 226911_at 0.1078 0.9002
GSE26886 EGFLAM 133584 226911_at 0.2324 0.2248
GSE45670 EGFLAM 133584 226911_at 0.1324 0.5372
GSE53622 EGFLAM 133584 70889 0.6920 0.0000
GSE53624 EGFLAM 133584 70889 0.7867 0.0000
GSE63941 EGFLAM 133584 226911_at -0.0842 0.9210
GSE77861 EGFLAM 133584 226911_at 0.1206 0.2495
GSE97050 EGFLAM 133584 A_23_P144911 0.2089 0.5960
SRP007169 EGFLAM 133584 RNAseq 1.9770 0.0250
SRP064894 EGFLAM 133584 RNAseq 1.4586 0.0001
SRP133303 EGFLAM 133584 RNAseq 0.1407 0.5047
SRP159526 EGFLAM 133584 RNAseq 1.7095 0.0046
SRP193095 EGFLAM 133584 RNAseq 1.2614 0.0000
SRP219564 EGFLAM 133584 RNAseq -0.3149 0.7084
TCGA EGFLAM 133584 RNAseq 0.1155 0.5069

Upregulated datasets: 4; Downregulated datasets: 0.  


 

Survival by EGFLAM expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EGFLAM:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EGFLAM 133584 10 0 20
GSE20123 EGFLAM 133584 10 0 20
GSE43470 EGFLAM 133584 18 0 25
GSE46452 EGFLAM 133584 5 22 32
GSE47630 EGFLAM 133584 6 12 22
GSE54993 EGFLAM 133584 5 4 61
GSE54994 EGFLAM 133584 25 2 26
GSE60625 EGFLAM 133584 0 0 11
GSE74703 EGFLAM 133584 14 0 22
GSE74704 EGFLAM 133584 9 0 11
TCGA EGFLAM 133584 52 6 38

Total number of gains: 154; Total number of losses: 46; Total Number of normals: 288.  


 

Somatic mutations of EGFLAM:

 

Generating mutation plots.

 

Highly correlated genes for EGFLAM:

 

Showing top 20/391 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EGFLAMCNTLN0.765931303
EGFLAMRAB340.749722303
EGFLAMHEXA0.725902303
EGFLAMICAM10.724049403
EGFLAMCCL80.723347303
EGFLAMFEZ10.717643403
EGFLAMPROX10.696799303
EGFLAMARHGAP240.696598303
EGFLAMBSN0.693188303
EGFLAMING10.692158303
EGFLAMCCDC1270.691548303
EGFLAMFBXO310.689875303
EGFLAMSEMA3A0.688573303
EGFLAMRGS30.686593504
EGFLAMRAB11FIP30.685651403
EGFLAMDMXL20.685369403
EGFLAMNFKBID0.684597303
EGFLAMRELL10.679166303
EGFLAMEFCAB70.677148303
EGFLAMDCHS10.674801303

For details and further investigation, click here