| Full name: bassoon presynaptic cytomatrix protein | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 3p21.31 | ||
| Entrez ID: 8927 | HGNC ID: HGNC:1117 | Ensembl Gene: ENSG00000164061 | OMIM ID: 604020 |
| Drug and gene relationship at DGIdb | |||
Expression of BSN:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | BSN | 8927 | 204586_at | 0.0964 | 0.7146 | |
| GSE20347 | BSN | 8927 | 204586_at | -0.0472 | 0.5484 | |
| GSE23400 | BSN | 8927 | 204586_at | -0.0582 | 0.1297 | |
| GSE26886 | BSN | 8927 | 204586_at | 0.2925 | 0.0037 | |
| GSE29001 | BSN | 8927 | 204586_at | -0.1609 | 0.4465 | |
| GSE38129 | BSN | 8927 | 204586_at | -0.1142 | 0.1982 | |
| GSE45670 | BSN | 8927 | 204586_at | 0.1784 | 0.0751 | |
| GSE53622 | BSN | 8927 | 14974 | -0.1258 | 0.3545 | |
| GSE53624 | BSN | 8927 | 14974 | 0.1175 | 0.3035 | |
| GSE63941 | BSN | 8927 | 204586_at | 0.1843 | 0.2868 | |
| GSE77861 | BSN | 8927 | 204586_at | -0.0368 | 0.8038 | |
| GSE97050 | BSN | 8927 | A_23_P29735 | -0.4247 | 0.1316 | |
| SRP133303 | BSN | 8927 | RNAseq | -0.0139 | 0.9608 | |
| SRP159526 | BSN | 8927 | RNAseq | 1.9280 | 0.0001 | |
| SRP193095 | BSN | 8927 | RNAseq | -0.0156 | 0.9562 | |
| SRP219564 | BSN | 8927 | RNAseq | 1.3306 | 0.0227 | |
| TCGA | BSN | 8927 | RNAseq | -0.8465 | 0.0003 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by BSN expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of BSN:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | BSN | 8927 | 0 | 18 | 12 | |
| GSE20123 | BSN | 8927 | 0 | 19 | 11 | |
| GSE43470 | BSN | 8927 | 0 | 18 | 25 | |
| GSE46452 | BSN | 8927 | 2 | 16 | 41 | |
| GSE47630 | BSN | 8927 | 1 | 24 | 15 | |
| GSE54993 | BSN | 8927 | 6 | 2 | 62 | |
| GSE54994 | BSN | 8927 | 0 | 36 | 17 | |
| GSE60625 | BSN | 8927 | 5 | 0 | 6 | |
| GSE74703 | BSN | 8927 | 0 | 14 | 22 | |
| GSE74704 | BSN | 8927 | 0 | 12 | 8 | |
| TCGA | BSN | 8927 | 0 | 78 | 18 |
Total number of gains: 14; Total number of losses: 237; Total Number of normals: 237.
Somatic mutations of BSN:
Generating mutation plots.
Highly correlated genes for BSN:
Showing top 20/603 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| BSN | ATG10 | 0.801567 | 3 | 0 | 3 |
| BSN | CNTD1 | 0.794604 | 3 | 0 | 3 |
| BSN | VAMP2 | 0.770618 | 5 | 0 | 4 |
| BSN | ST6GALNAC6 | 0.760776 | 3 | 0 | 3 |
| BSN | TMEM145 | 0.758308 | 4 | 0 | 4 |
| BSN | ZNF358 | 0.750626 | 3 | 0 | 3 |
| BSN | PHRF1 | 0.747894 | 3 | 0 | 3 |
| BSN | ATXN1L | 0.746644 | 3 | 0 | 3 |
| BSN | RAPGEF1 | 0.746501 | 3 | 0 | 3 |
| BSN | PRKACA | 0.745172 | 3 | 0 | 3 |
| BSN | DVL1 | 0.735179 | 3 | 0 | 3 |
| BSN | BBS9 | 0.732626 | 3 | 0 | 3 |
| BSN | CTDSP1 | 0.73043 | 3 | 0 | 3 |
| BSN | XKR8 | 0.724571 | 3 | 0 | 3 |
| BSN | A1BG | 0.7199 | 3 | 0 | 3 |
| BSN | ADCYAP1 | 0.714001 | 3 | 0 | 3 |
| BSN | CT55 | 0.712395 | 3 | 0 | 3 |
| BSN | RAB1B | 0.711429 | 3 | 0 | 3 |
| BSN | EVI5L | 0.710615 | 3 | 0 | 3 |
| BSN | NOTCH4 | 0.708073 | 3 | 0 | 3 |
For details and further investigation, click here
