ICAM1

 

Full name: intercellular adhesion molecule 1 Alias Symbol: BB2|CD54
Type: protein-coding gene Cytoband: 19p13.2
Entrez ID: 3383 HGNC ID: HGNC:5344 Ensembl Gene: ENSG00000090339 OMIM ID: 147840
Drug and gene relationship at DGIdb

 

ICAM1 involved pathways:

KEGG pathway Description View
hsa04064NF-kappa B signaling pathway
hsa04650Natural killer cell mediated cytotoxicity
hsa04670Leukocyte transendothelial migration
hsa04933AGE-RAGE signaling pathway in diabetic complications

 

Expression of ICAM1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ICAM1 3383 202637_s_at 0.3366 0.7140
GSE20347 ICAM1 3383 202637_s_at 0.5438 0.0015
GSE23400 ICAM1 3383 202637_s_at 0.4689 0.0001
GSE26886 ICAM1 3383 215485_s_at 0.2820 0.0105
GSE29001 ICAM1 3383 202637_s_at 0.9695 0.0020
GSE38129 ICAM1 3383 202637_s_at 0.3786 0.1802
GSE45670 ICAM1 3383 202637_s_at 0.5651 0.1394
GSE63941 ICAM1 3383 202637_s_at 0.4522 0.7357
GSE77861 ICAM1 3383 215485_s_at 0.0750 0.3650
GSE97050 ICAM1 3383 A_23_P153320 1.0617 0.0555
SRP007169 ICAM1 3383 RNAseq 2.2266 0.0000
SRP008496 ICAM1 3383 RNAseq 1.5319 0.0010
SRP064894 ICAM1 3383 RNAseq 1.3825 0.0000
SRP133303 ICAM1 3383 RNAseq 1.4939 0.0000
SRP159526 ICAM1 3383 RNAseq 1.4518 0.0003
SRP193095 ICAM1 3383 RNAseq 2.2873 0.0000
SRP219564 ICAM1 3383 RNAseq 2.7090 0.0000
TCGA ICAM1 3383 RNAseq 0.3914 0.0004

Upregulated datasets: 7; Downregulated datasets: 0.  


 

Survival by ICAM1 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of ICAM1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ICAM1 3383 4 3 23
GSE20123 ICAM1 3383 3 1 26
GSE43470 ICAM1 3383 3 6 34
GSE46452 ICAM1 3383 47 1 11
GSE47630 ICAM1 3383 4 7 29
GSE54993 ICAM1 3383 16 3 51
GSE54994 ICAM1 3383 7 13 33
GSE60625 ICAM1 3383 9 0 2
GSE74703 ICAM1 3383 3 4 29
GSE74704 ICAM1 3383 0 1 19
TCGA ICAM1 3383 13 15 68

Total number of gains: 109; Total number of losses: 54; Total Number of normals: 325.  


 

Somatic mutations of ICAM1:

 

Generating mutation plots.

 

Highly correlated genes for ICAM1:

 

Showing top 20/833 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ICAM1LYAR0.771794303
ICAM1FBLIM10.742212303
ICAM1RAVER10.742006303
ICAM1TMEM176A0.732711505
ICAM1CTRB20.728794303
ICAM1EGFLAM0.724049403
ICAM1GTF2E10.714191303
ICAM1POLR2J0.712689303
ICAM1TAF20.701133303
ICAM1NEIL20.700933303
ICAM1PPP1R350.698874303
ICAM1TPM30.698709303
ICAM1DCTN60.69806303
ICAM1PROX10.696267404
ICAM1CXCL110.691958707
ICAM1C3AR10.691554504
ICAM1FAU0.690034303
ICAM1TMEM176B0.688725505
ICAM1NAB20.68806303
ICAM1GLB1L0.686401303

For details and further investigation, click here