EPB41L3

 

Full name: erythrocyte membrane protein band 4.1 like 3 Alias Symbol: DAL1|KIAA0987|4.1B
Type: protein-coding gene Cytoband: 18p11.31
Entrez ID: 23136 HGNC ID: HGNC:3380 Ensembl Gene: ENSG00000082397 OMIM ID: 605331
Drug and gene relationship at DGIdb

 

EPB41L3 involved pathways:

KEGG pathway Description View
hsa04530Tight junction

 

Expression of EPB41L3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 EPB41L3 23136 206710_s_at -2.6661 0.0357
GSE20347 EPB41L3 23136 211776_s_at -2.9555 0.0000
GSE23400 EPB41L3 23136 211776_s_at -1.4016 0.0000
GSE26886 EPB41L3 23136 206710_s_at -5.2689 0.0000
GSE29001 EPB41L3 23136 212681_at -2.1912 0.0003
GSE38129 EPB41L3 23136 211776_s_at -2.5465 0.0000
GSE45670 EPB41L3 23136 206710_s_at -1.7574 0.0077
GSE53622 EPB41L3 23136 10335 -1.7355 0.0000
GSE53624 EPB41L3 23136 10335 -2.6738 0.0000
GSE63941 EPB41L3 23136 211776_s_at -2.3920 0.0508
GSE77861 EPB41L3 23136 211776_s_at -2.7442 0.0030
GSE97050 EPB41L3 23136 A_23_P4536 -0.4006 0.5551
SRP007169 EPB41L3 23136 RNAseq -1.4742 0.0071
SRP064894 EPB41L3 23136 RNAseq -1.2841 0.0003
SRP133303 EPB41L3 23136 RNAseq -1.4446 0.0000
SRP159526 EPB41L3 23136 RNAseq -1.8655 0.0000
SRP193095 EPB41L3 23136 RNAseq -2.1159 0.0000
SRP219564 EPB41L3 23136 RNAseq -1.6089 0.0068
TCGA EPB41L3 23136 RNAseq -0.1784 0.2296

Upregulated datasets: 0; Downregulated datasets: 16.  


 

Survival by EPB41L3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of EPB41L3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 EPB41L3 23136 8 2 20
GSE20123 EPB41L3 23136 8 2 20
GSE43470 EPB41L3 23136 4 5 34
GSE46452 EPB41L3 23136 3 21 35
GSE47630 EPB41L3 23136 7 17 16
GSE54993 EPB41L3 23136 6 3 61
GSE54994 EPB41L3 23136 10 8 35
GSE60625 EPB41L3 23136 0 4 7
GSE74703 EPB41L3 23136 3 3 30
GSE74704 EPB41L3 23136 6 1 13
TCGA EPB41L3 23136 34 19 43

Total number of gains: 89; Total number of losses: 85; Total Number of normals: 314.  


 

Somatic mutations of EPB41L3:

 

Generating mutation plots.

 

Highly correlated genes for EPB41L3:

 

Showing top 20/1750 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
EPB41L3SFTA20.882391404
EPB41L3GYS20.8806210010
EPB41L3GDPD30.85551910010
EPB41L3CYSRT10.854249606
EPB41L3RANBP90.84985711011
EPB41L3HCG220.844409606
EPB41L3FAM214A0.842404606
EPB41L3FAM3D0.841514606
EPB41L3NAGK0.84047811011
EPB41L3RMND5B0.83879711011
EPB41L3SCNN1B0.83832110010
EPB41L3C18orf250.83583811011
EPB41L3EHD30.83508512011
EPB41L3SLC16A60.83471911011
EPB41L3SNORA680.834502404
EPB41L3UBL30.83031111010
EPB41L3IL36A0.82978210010
EPB41L3BLNK0.82894711011
EPB41L3LRRFIP20.82467511011
EPB41L3SPNS20.82237505

For details and further investigation, click here