ERCC5

 

Full name: ERCC excision repair 5, endonuclease Alias Symbol: 
Type: protein-coding gene Cytoband: 13q33.1
Entrez ID: 2073 HGNC ID: HGNC:3437 Ensembl Gene: ENSG00000134899 OMIM ID: 133530
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ERCC5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ERCC5 2073 202414_at -0.4493 0.3915
GSE20347 ERCC5 2073 202414_at -0.5745 0.0001
GSE23400 ERCC5 2073 202414_at -0.1556 0.0136
GSE26886 ERCC5 2073 202414_at 0.0406 0.9030
GSE29001 ERCC5 2073 202414_at -0.4503 0.1565
GSE38129 ERCC5 2073 202414_at -0.5125 0.0000
GSE45670 ERCC5 2073 202414_at -0.3004 0.0647
GSE53622 ERCC5 2073 55483 -0.4678 0.0000
GSE53624 ERCC5 2073 55483 -0.4775 0.0000
GSE63941 ERCC5 2073 202414_at -0.8625 0.0627
GSE77861 ERCC5 2073 202414_at -0.5561 0.0081
GSE97050 ERCC5 2073 A_23_P117225 0.1198 0.6426
SRP007169 ERCC5 2073 RNAseq 0.5318 0.5757
SRP064894 ERCC5 2073 RNAseq -0.1131 0.4015
SRP133303 ERCC5 2073 RNAseq -0.6058 0.0000
SRP159526 ERCC5 2073 RNAseq -0.9715 0.0000
SRP193095 ERCC5 2073 RNAseq -0.6781 0.0000
SRP219564 ERCC5 2073 RNAseq -0.1338 0.7206
TCGA ERCC5 2073 RNAseq -0.1460 0.0028

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ERCC5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ERCC5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ERCC5 2073 4 9 17
GSE20123 ERCC5 2073 4 8 18
GSE43470 ERCC5 2073 4 12 27
GSE46452 ERCC5 2073 0 32 27
GSE47630 ERCC5 2073 3 26 11
GSE54993 ERCC5 2073 11 4 55
GSE54994 ERCC5 2073 6 10 37
GSE60625 ERCC5 2073 0 3 8
GSE74703 ERCC5 2073 3 10 23
GSE74704 ERCC5 2073 2 8 10
TCGA ERCC5 2073 15 35 46

Total number of gains: 52; Total number of losses: 157; Total Number of normals: 279.  


 

Somatic mutations of ERCC5:

 

Generating mutation plots.

 

Highly correlated genes for ERCC5:

 

Showing top 20/163 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ERCC5TNR0.720323303
ERCC5RWDD30.700685303
ERCC5BRSK10.695446303
ERCC5NAA160.694815404
ERCC5SUMF10.673415403
ERCC5TMEM370.672911303
ERCC5NSG10.671287504
ERCC5ICAM30.668843403
ERCC5CYB5D20.645985303
ERCC5PNPLA70.638095404
ERCC5PCCA0.6342251009
ERCC5MYH140.628142403
ERCC5MAST40.627024705
ERCC5PPP2R2B0.624985303
ERCC5RASSF60.624461403
ERCC5SLC37A10.614351705
ERCC5MYO1C0.614015403
ERCC5YIPF10.612387504
ERCC5CUL4A0.608308503
ERCC5PIDD10.607612503

For details and further investigation, click here