| Full name: neuronal vesicle trafficking associated 1 | Alias Symbol: P21|D4S234E|NEEP21 | ||
| Type: protein-coding gene | Cytoband: 4p16.3 | ||
| Entrez ID: 27065 | HGNC ID: HGNC:18790 | Ensembl Gene: ENSG00000168824 | OMIM ID: 607645 |
Screen Evidence:
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Expression of NSG1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | NSG1 | 27065 | 209569_x_at | -0.1932 | 0.8776 | |
| GSE20347 | NSG1 | 27065 | 209569_x_at | -1.5735 | 0.0000 | |
| GSE23400 | NSG1 | 27065 | 209569_x_at | -0.6079 | 0.0000 | |
| GSE26886 | NSG1 | 27065 | 209570_s_at | -1.1110 | 0.0041 | |
| GSE29001 | NSG1 | 27065 | 209570_s_at | -0.7005 | 0.2789 | |
| GSE38129 | NSG1 | 27065 | 209569_x_at | -0.7662 | 0.0163 | |
| GSE45670 | NSG1 | 27065 | 209569_x_at | -0.0581 | 0.9111 | |
| GSE63941 | NSG1 | 27065 | 209569_x_at | -2.0437 | 0.0890 | |
| GSE77861 | NSG1 | 27065 | 209570_s_at | -0.6674 | 0.0124 | |
| SRP007169 | NSG1 | 27065 | RNAseq | -0.1664 | 0.8333 | |
| SRP064894 | NSG1 | 27065 | RNAseq | -0.9918 | 0.0149 | |
| SRP133303 | NSG1 | 27065 | RNAseq | -1.1369 | 0.0006 | |
| SRP159526 | NSG1 | 27065 | RNAseq | -2.3928 | 0.0000 | |
| SRP193095 | NSG1 | 27065 | RNAseq | -1.4771 | 0.0000 | |
| SRP219564 | NSG1 | 27065 | RNAseq | -3.0550 | 0.0007 |
Upregulated datasets: 0; Downregulated datasets: 6.
Copy number change of NSG1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | NSG1 | 27065 | 0 | 17 | 13 | |
| GSE20123 | NSG1 | 27065 | 0 | 17 | 13 | |
| GSE43470 | NSG1 | 27065 | 0 | 17 | 26 | |
| GSE46452 | NSG1 | 27065 | 1 | 36 | 22 | |
| GSE47630 | NSG1 | 27065 | 1 | 19 | 20 | |
| GSE54993 | NSG1 | 27065 | 10 | 0 | 60 | |
| GSE54994 | NSG1 | 27065 | 3 | 12 | 38 | |
| GSE60625 | NSG1 | 27065 | 0 | 0 | 11 | |
| GSE74703 | NSG1 | 27065 | 0 | 13 | 23 | |
| GSE74704 | NSG1 | 27065 | 0 | 9 | 11 | |
| TCGA | NSG1 | 27065 | 7 | 47 | 42 |
Total number of gains: 22; Total number of losses: 187; Total Number of normals: 279.
Somatic mutations of NSG1:
Generating mutation plots.
Highly correlated genes for NSG1:
Showing top 20/524 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| NSG1 | ZHX1 | 0.761804 | 3 | 0 | 3 |
| NSG1 | SUMF1 | 0.753731 | 3 | 0 | 3 |
| NSG1 | MAN2B2 | 0.722495 | 3 | 0 | 3 |
| NSG1 | IL22RA1 | 0.721598 | 5 | 0 | 5 |
| NSG1 | ACPP | 0.690074 | 5 | 0 | 5 |
| NSG1 | ZBTB43 | 0.684998 | 4 | 0 | 4 |
| NSG1 | BTBD11 | 0.681691 | 3 | 0 | 3 |
| NSG1 | ERCC5 | 0.671287 | 5 | 0 | 4 |
| NSG1 | OXSR1 | 0.667008 | 6 | 0 | 6 |
| NSG1 | ALG14 | 0.659451 | 3 | 0 | 3 |
| NSG1 | BBOX1 | 0.649009 | 7 | 0 | 6 |
| NSG1 | SMIM14 | 0.648759 | 4 | 0 | 3 |
| NSG1 | MXD1 | 0.647198 | 5 | 0 | 5 |
| NSG1 | TLCD2 | 0.644909 | 4 | 0 | 3 |
| NSG1 | VPS4B | 0.643681 | 5 | 0 | 5 |
| NSG1 | ITM2B | 0.639817 | 6 | 0 | 4 |
| NSG1 | TOLLIP | 0.638864 | 6 | 0 | 4 |
| NSG1 | PMVK | 0.635346 | 6 | 0 | 4 |
| NSG1 | POF1B | 0.635188 | 4 | 0 | 3 |
| NSG1 | CAPG | 0.635171 | 5 | 0 | 4 |
For details and further investigation, click here
