FAM149B1

 

Full name: family with sequence similarity 149 member B1 Alias Symbol: 
Type: protein-coding gene Cytoband: 10q22.2
Entrez ID: 317662 HGNC ID: HGNC:29162 Ensembl Gene: ENSG00000138286 OMIM ID: 618413
Drug and gene relationship at DGIdb

 

Expression of FAM149B1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM149B1 317662 213463_s_at -0.7409 0.0343
GSE20347 FAM149B1 317662 213463_s_at -0.8451 0.0000
GSE23400 FAM149B1 317662 213463_s_at -0.1774 0.0000
GSE26886 FAM149B1 317662 213463_s_at -1.2625 0.0000
GSE29001 FAM149B1 317662 213463_s_at -1.0360 0.0009
GSE38129 FAM149B1 317662 213463_s_at -0.8445 0.0000
GSE45670 FAM149B1 317662 213463_s_at -0.5918 0.0006
GSE53622 FAM149B1 317662 43066 -0.5080 0.0000
GSE53624 FAM149B1 317662 43066 -0.6505 0.0000
GSE63941 FAM149B1 317662 213463_s_at -0.8555 0.1430
GSE77861 FAM149B1 317662 213463_s_at -0.4983 0.0060
GSE97050 FAM149B1 317662 A_33_P3422679 -0.3684 0.2559
SRP007169 FAM149B1 317662 RNAseq -1.3561 0.0007
SRP008496 FAM149B1 317662 RNAseq -1.1180 0.0000
SRP064894 FAM149B1 317662 RNAseq -0.3816 0.0052
SRP133303 FAM149B1 317662 RNAseq -0.2035 0.1566
SRP159526 FAM149B1 317662 RNAseq -0.7499 0.0002
SRP193095 FAM149B1 317662 RNAseq -0.5602 0.0000
SRP219564 FAM149B1 317662 RNAseq -0.5422 0.0047
TCGA FAM149B1 317662 RNAseq -0.2286 0.0000

Upregulated datasets: 0; Downregulated datasets: 4.  


 

Survival by FAM149B1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAM149B1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM149B1 317662 3 4 23
GSE20123 FAM149B1 317662 3 3 24
GSE43470 FAM149B1 317662 1 8 34
GSE46452 FAM149B1 317662 0 11 48
GSE47630 FAM149B1 317662 2 14 24
GSE54993 FAM149B1 317662 7 0 63
GSE54994 FAM149B1 317662 2 10 41
GSE60625 FAM149B1 317662 0 0 11
GSE74703 FAM149B1 317662 1 5 30
GSE74704 FAM149B1 317662 1 1 18
TCGA FAM149B1 317662 11 23 62

Total number of gains: 31; Total number of losses: 79; Total Number of normals: 378.  


 

Somatic mutations of FAM149B1:

 

Generating mutation plots.

 

Highly correlated genes for FAM149B1:

 

Showing top 20/1732 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM149B1SLC35B30.817624303
FAM149B1ZNF4360.803315404
FAM149B1ZNF5400.788042303
FAM149B1GALNT110.746623404
FAM149B1USP9Y0.746536303
FAM149B1EIF4E30.746215807
FAM149B1KDM5D0.742303303
FAM149B1RHBDF10.73372505
FAM149B1CRYL10.73113511010
FAM149B1DLG20.7306911009
FAM149B1FBXL30.726057504
FAM149B1RAB40AL0.723352303
FAM149B1SORT10.72325811011
FAM149B1CCSER20.719796808
FAM149B1PAIP2B0.71900911010
FAM149B1UBQLN10.718774303
FAM149B1SLC25A270.717739403
FAM149B1FCER1A0.71684110010
FAM149B1TMEM132C0.715122303
FAM149B1C3orf380.713734504

For details and further investigation, click here