| Full name: family with sequence similarity 228 member B | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 2p23.3 | ||
| Entrez ID: 375190 | HGNC ID: HGNC:24736 | Ensembl Gene: ENSG00000219626 | OMIM ID: |
Expression of FAM228B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | FAM228B | 375190 | 230435_at | -0.6893 | 0.4053 | |
| GSE26886 | FAM228B | 375190 | 230435_at | 0.6804 | 0.0420 | |
| GSE45670 | FAM228B | 375190 | 230435_at | -1.2970 | 0.0000 | |
| GSE53622 | FAM228B | 375190 | 127224 | -1.0226 | 0.0000 | |
| GSE53624 | FAM228B | 375190 | 127224 | -0.9473 | 0.0000 | |
| GSE63941 | FAM228B | 375190 | 230435_at | -1.1065 | 0.1857 | |
| GSE77861 | FAM228B | 375190 | 230435_at | -0.2082 | 0.3792 | |
| SRP064894 | FAM228B | 375190 | RNAseq | -0.1306 | 0.6953 | |
| SRP133303 | FAM228B | 375190 | RNAseq | -0.7801 | 0.0002 | |
| SRP159526 | FAM228B | 375190 | RNAseq | -0.4146 | 0.3339 | |
| SRP193095 | FAM228B | 375190 | RNAseq | -0.1355 | 0.3780 | |
| SRP219564 | FAM228B | 375190 | RNAseq | -0.3480 | 0.5615 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by FAM228B expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of FAM228B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | FAM228B | 375190 | 10 | 2 | 18 | |
| GSE20123 | FAM228B | 375190 | 10 | 2 | 18 | |
| GSE43470 | FAM228B | 375190 | 2 | 1 | 40 | |
| GSE46452 | FAM228B | 375190 | 3 | 4 | 52 | |
| GSE47630 | FAM228B | 375190 | 8 | 0 | 32 | |
| GSE54993 | FAM228B | 375190 | 0 | 7 | 63 | |
| GSE54994 | FAM228B | 375190 | 10 | 0 | 43 | |
| GSE60625 | FAM228B | 375190 | 0 | 3 | 8 | |
| GSE74703 | FAM228B | 375190 | 2 | 0 | 34 | |
| GSE74704 | FAM228B | 375190 | 9 | 1 | 10 | |
| TCGA | FAM228B | 375190 | 36 | 4 | 56 |
Total number of gains: 90; Total number of losses: 24; Total Number of normals: 374.
Somatic mutations of FAM228B:
Generating mutation plots.
Highly correlated genes for FAM228B:
Showing top 20/583 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| FAM228B | CHRDL1 | 0.734586 | 3 | 0 | 3 |
| FAM228B | RAB11FIP2 | 0.729198 | 3 | 0 | 3 |
| FAM228B | ARHGAP6 | 0.728041 | 4 | 0 | 4 |
| FAM228B | PPP1R12B | 0.727726 | 4 | 0 | 4 |
| FAM228B | ANGPTL1 | 0.72593 | 4 | 0 | 4 |
| FAM228B | ADAMTSL3 | 0.723501 | 3 | 0 | 3 |
| FAM228B | LIMS2 | 0.722976 | 4 | 0 | 4 |
| FAM228B | MYOC | 0.713372 | 4 | 0 | 4 |
| FAM228B | ITGA7 | 0.711479 | 4 | 0 | 4 |
| FAM228B | PGPEP1 | 0.709466 | 3 | 0 | 3 |
| FAM228B | MBNL1-AS1 | 0.707725 | 3 | 0 | 3 |
| FAM228B | ZNF471 | 0.707119 | 4 | 0 | 4 |
| FAM228B | KCNB1 | 0.706897 | 3 | 0 | 3 |
| FAM228B | PBX1 | 0.699911 | 4 | 0 | 3 |
| FAM228B | CCNI | 0.699462 | 3 | 0 | 3 |
| FAM228B | DTNA | 0.693817 | 3 | 0 | 3 |
| FAM228B | MYOCD | 0.692959 | 4 | 0 | 4 |
| FAM228B | CDH19 | 0.691931 | 4 | 0 | 4 |
| FAM228B | AQP1 | 0.691859 | 4 | 0 | 4 |
| FAM228B | GNAQ | 0.691822 | 3 | 0 | 3 |
For details and further investigation, click here
