| Full name: cadherin 19 | Alias Symbol: CDH7 | ||
| Type: protein-coding gene | Cytoband: 18q22.1 | ||
| Entrez ID: 28513 | HGNC ID: HGNC:1758 | Ensembl Gene: ENSG00000071991 | OMIM ID: 603016 |
| Drug and gene relationship at DGIdb | |||
Expression of CDH19:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CDH19 | 28513 | 206898_at | -2.4050 | 0.1345 | |
| GSE20347 | CDH19 | 28513 | 206898_at | -0.5447 | 0.0070 | |
| GSE23400 | CDH19 | 28513 | 206898_at | -0.4811 | 0.0001 | |
| GSE26886 | CDH19 | 28513 | 235639_at | -0.0172 | 0.8923 | |
| GSE29001 | CDH19 | 28513 | 206898_at | -0.3899 | 0.6269 | |
| GSE38129 | CDH19 | 28513 | 206898_at | -1.6033 | 0.0008 | |
| GSE45670 | CDH19 | 28513 | 206898_at | -3.0303 | 0.0000 | |
| GSE53622 | CDH19 | 28513 | 63853 | -2.2843 | 0.0000 | |
| GSE53624 | CDH19 | 28513 | 63853 | -2.4505 | 0.0000 | |
| GSE63941 | CDH19 | 28513 | 235639_at | 0.1578 | 0.1817 | |
| GSE77861 | CDH19 | 28513 | 235639_at | 0.0935 | 0.5509 | |
| GSE97050 | CDH19 | 28513 | A_23_P38735 | -0.7759 | 0.2641 | |
| SRP064894 | CDH19 | 28513 | RNAseq | -0.2092 | 0.7071 | |
| SRP133303 | CDH19 | 28513 | RNAseq | -2.5154 | 0.0000 | |
| TCGA | CDH19 | 28513 | RNAseq | -1.6151 | 0.0025 |
Upregulated datasets: 0; Downregulated datasets: 6.
Survival by CDH19 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CDH19:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CDH19 | 28513 | 0 | 10 | 20 | |
| GSE20123 | CDH19 | 28513 | 0 | 10 | 20 | |
| GSE43470 | CDH19 | 28513 | 0 | 7 | 36 | |
| GSE46452 | CDH19 | 28513 | 1 | 26 | 32 | |
| GSE47630 | CDH19 | 28513 | 5 | 21 | 14 | |
| GSE54993 | CDH19 | 28513 | 9 | 0 | 61 | |
| GSE54994 | CDH19 | 28513 | 1 | 18 | 34 | |
| GSE60625 | CDH19 | 28513 | 0 | 4 | 7 | |
| GSE74703 | CDH19 | 28513 | 0 | 7 | 29 | |
| GSE74704 | CDH19 | 28513 | 0 | 8 | 12 | |
| TCGA | CDH19 | 28513 | 8 | 46 | 42 |
Total number of gains: 24; Total number of losses: 157; Total Number of normals: 307.
Somatic mutations of CDH19:
Generating mutation plots.
Highly correlated genes for CDH19:
Showing top 20/711 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CDH19 | RBPMS2 | 0.849906 | 5 | 0 | 5 |
| CDH19 | XKR4 | 0.840782 | 5 | 0 | 5 |
| CDH19 | PPP1R12B | 0.82265 | 8 | 0 | 8 |
| CDH19 | RBFOX3 | 0.813703 | 3 | 0 | 3 |
| CDH19 | AQP1 | 0.803224 | 8 | 0 | 8 |
| CDH19 | MAMDC2 | 0.80138 | 5 | 0 | 5 |
| CDH19 | MYOT | 0.79857 | 8 | 0 | 8 |
| CDH19 | PDZRN4 | 0.7985 | 9 | 0 | 9 |
| CDH19 | HSPB7 | 0.797764 | 9 | 0 | 9 |
| CDH19 | ATP1A2 | 0.796643 | 9 | 0 | 8 |
| CDH19 | ITGA7 | 0.796146 | 8 | 0 | 8 |
| CDH19 | CYP21A2 | 0.794993 | 3 | 0 | 3 |
| CDH19 | FLNC | 0.792755 | 8 | 0 | 8 |
| CDH19 | PPP1R14A | 0.790192 | 5 | 0 | 5 |
| CDH19 | PRUNE2 | 0.789846 | 9 | 0 | 8 |
| CDH19 | CHRDL1 | 0.781397 | 8 | 0 | 7 |
| CDH19 | PLP1 | 0.778994 | 9 | 0 | 8 |
| CDH19 | PRR26 | 0.775959 | 4 | 0 | 4 |
| CDH19 | RNF150 | 0.772821 | 5 | 0 | 5 |
| CDH19 | CBX7 | 0.772813 | 8 | 0 | 8 |
For details and further investigation, click here
