PPP1R12B

 

Full name: protein phosphatase 1 regulatory subunit 12B Alias Symbol: MGC87886|MGC131980|PP1bp55
Type: protein-coding gene Cytoband: 1q32.1
Entrez ID: 4660 HGNC ID: HGNC:7619 Ensembl Gene: ENSG00000077157 OMIM ID: 603768
Drug and gene relationship at DGIdb

 

PPP1R12B involved pathways:

KEGG pathway Description View
hsa04270Vascular smooth muscle contraction
hsa04510Focal adhesion
hsa04810Regulation of actin cytoskeleton
hsa04921Oxytocin signaling pathway
hsa05205Proteoglycans in cancer

 

Expression of PPP1R12B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 PPP1R12B 4660 201957_at -1.6910 0.1611
GSE20347 PPP1R12B 4660 201957_at -0.5407 0.0735
GSE23400 PPP1R12B 4660 201957_at -0.8235 0.0000
GSE26886 PPP1R12B 4660 201957_at 0.0953 0.8226
GSE29001 PPP1R12B 4660 201957_at -0.7723 0.0339
GSE38129 PPP1R12B 4660 201957_at -1.1972 0.0146
GSE45670 PPP1R12B 4660 201957_at -2.5633 0.0000
GSE53622 PPP1R12B 4660 13339 -2.5014 0.0000
GSE53624 PPP1R12B 4660 13339 -2.2964 0.0000
GSE63941 PPP1R12B 4660 201957_at -0.9661 0.0680
GSE77861 PPP1R12B 4660 201957_at 0.0426 0.8739
GSE97050 PPP1R12B 4660 A_33_P3257609 -1.9813 0.0844
SRP007169 PPP1R12B 4660 RNAseq 0.3293 0.5120
SRP008496 PPP1R12B 4660 RNAseq 0.8116 0.0412
SRP064894 PPP1R12B 4660 RNAseq -0.8105 0.0471
SRP133303 PPP1R12B 4660 RNAseq -1.7577 0.0000
SRP159526 PPP1R12B 4660 RNAseq -1.5473 0.0104
SRP193095 PPP1R12B 4660 RNAseq -0.2716 0.0863
SRP219564 PPP1R12B 4660 RNAseq -0.7755 0.4356
TCGA PPP1R12B 4660 RNAseq -0.6477 0.0000

Upregulated datasets: 0; Downregulated datasets: 6.  


 

Survival by PPP1R12B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of PPP1R12B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 PPP1R12B 4660 11 0 19
GSE20123 PPP1R12B 4660 11 0 19
GSE43470 PPP1R12B 4660 6 0 37
GSE46452 PPP1R12B 4660 3 1 55
GSE47630 PPP1R12B 4660 14 0 26
GSE54993 PPP1R12B 4660 0 6 64
GSE54994 PPP1R12B 4660 15 0 38
GSE60625 PPP1R12B 4660 0 0 11
GSE74703 PPP1R12B 4660 6 0 30
GSE74704 PPP1R12B 4660 5 0 15
TCGA PPP1R12B 4660 43 4 49

Total number of gains: 114; Total number of losses: 11; Total Number of normals: 363.  


 

Somatic mutations of PPP1R12B:

 

Generating mutation plots.

 

Highly correlated genes for PPP1R12B:

 

Showing top 20/1263 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
PPP1R12BATP1A20.896983909
PPP1R12BDAAM20.881559808
PPP1R12BXKR40.869867505
PPP1R12BLMOD10.86162812011
PPP1R12BSORCS10.860777404
PPP1R12BSYNM0.84177111011
PPP1R12BDES0.84034511010
PPP1R12BLPP0.839435807
PPP1R12BCYP21A20.837833303
PPP1R12BRAB9B0.834807606
PPP1R12BCASQ20.83140211011
PPP1R12BACTBL20.828357303
PPP1R12BBCHE0.825488808
PPP1R12BNTN10.82506505
PPP1R12BITGA70.82436310010
PPP1R12BCACNB20.824063808
PPP1R12BHSPB70.823623908
PPP1R12BCDH190.82265808
PPP1R12BCNN10.8224611009
PPP1R12BCHRDL10.822084909

For details and further investigation, click here