| Full name: family with sequence similarity 90 member A1 | Alias Symbol: FLJ10408 | ||
| Type: protein-coding gene | Cytoband: 12p13.31 | ||
| Entrez ID: 55138 | HGNC ID: HGNC:25526 | Ensembl Gene: ENSG00000171847 | OMIM ID: 613041 |
| Drug and gene relationship at DGIdb | |||
Expression of FAM90A1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | FAM90A1 | 55138 | 220535_at | 0.4930 | 0.1291 | |
| GSE20347 | FAM90A1 | 55138 | 220535_at | 0.1675 | 0.3082 | |
| GSE23400 | FAM90A1 | 55138 | 220535_at | -0.2369 | 0.0000 | |
| GSE26886 | FAM90A1 | 55138 | 220535_at | 0.2015 | 0.1977 | |
| GSE29001 | FAM90A1 | 55138 | 220535_at | 0.2844 | 0.1734 | |
| GSE38129 | FAM90A1 | 55138 | 220535_at | 0.3481 | 0.0282 | |
| GSE45670 | FAM90A1 | 55138 | 220535_at | 0.1790 | 0.3417 | |
| GSE53622 | FAM90A1 | 55138 | 86356 | 0.4297 | 0.0056 | |
| GSE53624 | FAM90A1 | 55138 | 86356 | 0.5974 | 0.0000 | |
| GSE63941 | FAM90A1 | 55138 | 220535_at | 0.2163 | 0.3401 | |
| GSE77861 | FAM90A1 | 55138 | 220535_at | -0.1103 | 0.4245 | |
| GSE97050 | FAM90A1 | 55138 | A_23_P151059 | -0.3217 | 0.2204 | |
| SRP133303 | FAM90A1 | 55138 | RNAseq | 0.3130 | 0.3588 | |
| SRP159526 | FAM90A1 | 55138 | RNAseq | 0.5561 | 0.3880 | |
| TCGA | FAM90A1 | 55138 | RNAseq | 0.3390 | 0.5161 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by FAM90A1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of FAM90A1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | FAM90A1 | 55138 | 6 | 3 | 21 | |
| GSE20123 | FAM90A1 | 55138 | 6 | 3 | 21 | |
| GSE43470 | FAM90A1 | 55138 | 7 | 3 | 33 | |
| GSE46452 | FAM90A1 | 55138 | 10 | 1 | 48 | |
| GSE47630 | FAM90A1 | 55138 | 12 | 2 | 26 | |
| GSE54993 | FAM90A1 | 55138 | 1 | 10 | 59 | |
| GSE54994 | FAM90A1 | 55138 | 9 | 3 | 41 | |
| GSE60625 | FAM90A1 | 55138 | 0 | 1 | 10 | |
| GSE74703 | FAM90A1 | 55138 | 7 | 2 | 27 | |
| GSE74704 | FAM90A1 | 55138 | 4 | 2 | 14 | |
| TCGA | FAM90A1 | 55138 | 40 | 6 | 50 |
Total number of gains: 102; Total number of losses: 36; Total Number of normals: 350.
Somatic mutations of FAM90A1:
Generating mutation plots.
Highly correlated genes for FAM90A1:
Showing top 20/149 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| FAM90A1 | GRWD1 | 0.810338 | 3 | 0 | 3 |
| FAM90A1 | ZNF789 | 0.782002 | 3 | 0 | 3 |
| FAM90A1 | PACS1 | 0.759563 | 3 | 0 | 3 |
| FAM90A1 | PREB | 0.752386 | 3 | 0 | 3 |
| FAM90A1 | MED9 | 0.75052 | 3 | 0 | 3 |
| FAM90A1 | DNAJC11 | 0.740307 | 3 | 0 | 3 |
| FAM90A1 | XRCC1 | 0.737999 | 3 | 0 | 3 |
| FAM90A1 | ZNF607 | 0.730327 | 3 | 0 | 3 |
| FAM90A1 | ZNF324 | 0.729382 | 3 | 0 | 3 |
| FAM90A1 | MRPS6 | 0.723831 | 3 | 0 | 3 |
| FAM90A1 | RNASEH2B | 0.722053 | 3 | 0 | 3 |
| FAM90A1 | NEU3 | 0.716591 | 3 | 0 | 3 |
| FAM90A1 | GPAA1 | 0.70848 | 3 | 0 | 3 |
| FAM90A1 | TMEM63B | 0.705286 | 4 | 0 | 3 |
| FAM90A1 | ZXDC | 0.694287 | 3 | 0 | 3 |
| FAM90A1 | INO80E | 0.691608 | 3 | 0 | 3 |
| FAM90A1 | MYO9B | 0.689169 | 3 | 0 | 3 |
| FAM90A1 | ZNF577 | 0.68662 | 3 | 0 | 3 |
| FAM90A1 | CHD4 | 0.683866 | 4 | 0 | 3 |
| FAM90A1 | PDCD2L | 0.678509 | 3 | 0 | 3 |
For details and further investigation, click here
