FGF4

 

Full name: fibroblast growth factor 4 Alias Symbol: K-FGF|HBGF-4|HST|HST-1|KFGF
Type: protein-coding gene Cytoband: 11q13.3
Entrez ID: 2249 HGNC ID: HGNC:3682 Ensembl Gene: ENSG00000075388 OMIM ID: 164980
Drug and gene relationship at DGIdb

 

FGF4 involved pathways:

KEGG pathway Description View
hsa04010MAPK signaling pathway
hsa04014Ras signaling pathway
hsa04015Rap1 signaling pathway
hsa04151PI3K-Akt signaling pathway
hsa05200Pathways in cancer
hsa05218Melanoma

 

Expression of FGF4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FGF4 2249 206783_at -0.1576 0.4859
GSE20347 FGF4 2249 206783_at 0.1146 0.3340
GSE23400 FGF4 2249 206783_at -0.0618 0.1440
GSE26886 FGF4 2249 1552982_a_at 0.1059 0.3551
GSE29001 FGF4 2249 206783_at -0.1731 0.3071
GSE38129 FGF4 2249 206783_at -0.0476 0.7987
GSE45670 FGF4 2249 206783_at 0.1110 0.2584
GSE53622 FGF4 2249 22440 0.5024 0.0000
GSE53624 FGF4 2249 22440 0.6385 0.0000
GSE63941 FGF4 2249 206783_at 0.1000 0.5385
GSE77861 FGF4 2249 206783_at -0.0965 0.3569
TCGA FGF4 2249 RNAseq 2.1656 0.2931

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by FGF4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FGF4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FGF4 2249 19 1 10
GSE20123 FGF4 2249 19 1 10
GSE43470 FGF4 2249 16 2 25
GSE46452 FGF4 2249 36 1 22
GSE47630 FGF4 2249 20 1 19
GSE54993 FGF4 2249 1 25 44
GSE54994 FGF4 2249 28 3 22
GSE60625 FGF4 2249 0 8 3
GSE74703 FGF4 2249 13 1 22
GSE74704 FGF4 2249 13 0 7
TCGA FGF4 2249 63 2 31

Total number of gains: 228; Total number of losses: 45; Total Number of normals: 215.  


 

Somatic mutations of FGF4:

 

Generating mutation plots.

 

Highly correlated genes for FGF4:

 

Showing top 20/552 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FGF4TBXA2R0.73745404
FGF4TULP20.726593303
FGF4MUC130.721192303
FGF4TRPM80.717999303
FGF4AGTR20.700384403
FGF4KCNMB20.691407504
FGF4NOX50.688528303
FGF4STXBP60.686358303
FGF4PIWIL20.685841404
FGF4LIMD1-AS10.682379303
FGF4MLNR0.675814303
FGF4NR0B20.673251404
FGF4GABRA10.672205404
FGF4OPRK10.66939303
FGF4KRTAP4-70.667932303
FGF4VWA70.667302504
FGF4RHAG0.665056303
FGF4FASLG0.662853303
FGF4ATP8A20.661128505
FGF4ARHGAP440.658971303

For details and further investigation, click here