| Full name: LIMD1 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3p21.31 | ||
| Entrez ID: 644714 | HGNC ID: HGNC:44107 | Ensembl Gene: ENSG00000230530 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LIMD1-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LIMD1-AS1 | 644714 | 233541_at | -0.0665 | 0.7852 | |
| GSE26886 | LIMD1-AS1 | 644714 | 233541_at | -0.2573 | 0.0251 | |
| GSE45670 | LIMD1-AS1 | 644714 | 233541_at | 0.0074 | 0.9490 | |
| GSE63941 | LIMD1-AS1 | 644714 | 233541_at | 0.1866 | 0.1897 | |
| GSE77861 | LIMD1-AS1 | 644714 | 233541_at | -0.1628 | 0.0924 | |
| SRP007169 | LIMD1-AS1 | 644714 | RNAseq | -0.2881 | 0.5764 | |
| SRP008496 | LIMD1-AS1 | 644714 | RNAseq | 0.2164 | 0.6498 | |
| SRP159526 | LIMD1-AS1 | 644714 | RNAseq | 0.2631 | 0.5974 | |
| SRP219564 | LIMD1-AS1 | 644714 | RNAseq | 1.1284 | 0.2601 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of LIMD1-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LIMD1-AS1 | 644714 | 0 | 17 | 13 | |
| GSE20123 | LIMD1-AS1 | 644714 | 0 | 18 | 12 | |
| GSE43470 | LIMD1-AS1 | 644714 | 0 | 20 | 23 | |
| GSE46452 | LIMD1-AS1 | 644714 | 2 | 17 | 40 | |
| GSE47630 | LIMD1-AS1 | 644714 | 1 | 24 | 15 | |
| GSE54993 | LIMD1-AS1 | 644714 | 7 | 2 | 61 | |
| GSE54994 | LIMD1-AS1 | 644714 | 0 | 36 | 17 | |
| GSE60625 | LIMD1-AS1 | 644714 | 5 | 0 | 6 | |
| GSE74703 | LIMD1-AS1 | 644714 | 0 | 15 | 21 | |
| GSE74704 | LIMD1-AS1 | 644714 | 0 | 12 | 8 |
Total number of gains: 15; Total number of losses: 161; Total Number of normals: 216.
Somatic mutations of LIMD1-AS1:
Generating mutation plots.
Highly correlated genes for LIMD1-AS1:
Showing top 20/181 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LIMD1-AS1 | ASCL3 | 0.721171 | 3 | 0 | 3 |
| LIMD1-AS1 | MRVI1-AS1 | 0.688773 | 3 | 0 | 3 |
| LIMD1-AS1 | IRX1 | 0.683402 | 3 | 0 | 3 |
| LIMD1-AS1 | FGF4 | 0.682379 | 3 | 0 | 3 |
| LIMD1-AS1 | SOX10 | 0.673604 | 5 | 0 | 4 |
| LIMD1-AS1 | AMHR2 | 0.672047 | 3 | 0 | 3 |
| LIMD1-AS1 | SMAD1-AS2 | 0.66956 | 3 | 0 | 3 |
| LIMD1-AS1 | RARG | 0.66738 | 3 | 0 | 3 |
| LIMD1-AS1 | GPR62 | 0.666902 | 3 | 0 | 3 |
| LIMD1-AS1 | OR2H1 | 0.663377 | 3 | 0 | 3 |
| LIMD1-AS1 | CRIP2 | 0.661504 | 3 | 0 | 3 |
| LIMD1-AS1 | PSG2 | 0.652901 | 3 | 0 | 3 |
| LIMD1-AS1 | MRGPRX2 | 0.652022 | 4 | 0 | 4 |
| LIMD1-AS1 | TCL6 | 0.651581 | 4 | 0 | 4 |
| LIMD1-AS1 | LINC00636 | 0.651469 | 3 | 0 | 3 |
| LIMD1-AS1 | MROH8 | 0.647522 | 3 | 0 | 3 |
| LIMD1-AS1 | CYP4A11 | 0.646408 | 3 | 0 | 3 |
| LIMD1-AS1 | OR7C1 | 0.645679 | 3 | 0 | 3 |
| LIMD1-AS1 | NLRP12 | 0.645297 | 4 | 0 | 3 |
| LIMD1-AS1 | CHRNA2 | 0.644812 | 4 | 0 | 3 |
For details and further investigation, click here
