FGF5

 

Full name: fibroblast growth factor 5 Alias Symbol: 
Type: protein-coding gene Cytoband: 4q21.21
Entrez ID: 2250 HGNC ID: HGNC:3683 Ensembl Gene: ENSG00000138675 OMIM ID: 165190
Drug and gene relationship at DGIdb

 

FGF5 involved pathways:

KEGG pathway Description View
hsa04010MAPK signaling pathway
hsa04014Ras signaling pathway
hsa04015Rap1 signaling pathway
hsa04151PI3K-Akt signaling pathway
hsa05200Pathways in cancer
hsa05218Melanoma

 

Expression of FGF5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FGF5 2250 208378_x_at 0.0676 0.7917
GSE20347 FGF5 2250 210310_s_at -0.0411 0.5886
GSE23400 FGF5 2250 208378_x_at -0.0619 0.0850
GSE26886 FGF5 2250 210311_at -0.3655 0.0112
GSE29001 FGF5 2250 208378_x_at -0.0857 0.6860
GSE38129 FGF5 2250 210310_s_at -0.1010 0.1137
GSE45670 FGF5 2250 210310_s_at 0.0536 0.4879
GSE53622 FGF5 2250 116367 -1.0561 0.0000
GSE53624 FGF5 2250 116367 -1.5911 0.0000
GSE63941 FGF5 2250 210310_s_at -1.4213 0.0084
GSE77861 FGF5 2250 210310_s_at -0.1632 0.1651
GSE97050 FGF5 2250 A_33_P3411907 -1.1764 0.1075
SRP007169 FGF5 2250 RNAseq -1.5584 0.0188
SRP064894 FGF5 2250 RNAseq -2.9116 0.0000
SRP133303 FGF5 2250 RNAseq -1.2897 0.0000
SRP159526 FGF5 2250 RNAseq -4.0331 0.0000
SRP193095 FGF5 2250 RNAseq -1.4935 0.0000
SRP219564 FGF5 2250 RNAseq -2.5739 0.0000
TCGA FGF5 2250 RNAseq -0.1913 0.7177

Upregulated datasets: 0; Downregulated datasets: 9.  


 

Survival by FGF5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FGF5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FGF5 2250 0 10 20
GSE20123 FGF5 2250 1 10 19
GSE43470 FGF5 2250 0 13 30
GSE46452 FGF5 2250 1 36 22
GSE47630 FGF5 2250 1 19 20
GSE54993 FGF5 2250 8 0 62
GSE54994 FGF5 2250 0 9 44
GSE60625 FGF5 2250 0 0 11
GSE74703 FGF5 2250 0 11 25
GSE74704 FGF5 2250 1 5 14
TCGA FGF5 2250 11 34 51

Total number of gains: 23; Total number of losses: 147; Total Number of normals: 318.  


 

Somatic mutations of FGF5:

 

Generating mutation plots.

 

Highly correlated genes for FGF5:

 

Showing top 20/511 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FGF5HES50.906329303
FGF5FAM163B0.886289303
FGF5KRTAP20-10.864425303
FGF5OR2Z10.831409303
FGF5MFSD2B0.808125303
FGF5BARHL20.804624303
FGF5MUC220.797027303
FGF5NCCRP10.792597303
FGF5OR10G80.773438303
FGF5DHRS7C0.773123303
FGF5OTOP30.770668303
FGF5KPRP0.769171303
FGF5TEN10.764782303
FGF5MAFG0.75514404
FGF5ACOT80.75302404
FGF5GPX60.743745303
FGF5RNF2220.740056303
FGF5TMPRSS11A0.739554303
FGF5KCNA70.739412404
FGF5CGA0.735585303

For details and further investigation, click here