| Full name: polypeptide N-acetylgalactosaminyltransferase 12 | Alias Symbol: GalNAc-T12 | ||
| Type: protein-coding gene | Cytoband: 9q22.33 | ||
| Entrez ID: 79695 | HGNC ID: HGNC:19877 | Ensembl Gene: ENSG00000119514 | OMIM ID: 610290 |
| Drug and gene relationship at DGIdb | |||
Expression of GALNT12:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | GALNT12 | 79695 | 218885_s_at | -1.7625 | 0.0686 | |
| GSE20347 | GALNT12 | 79695 | 218885_s_at | -2.8737 | 0.0000 | |
| GSE23400 | GALNT12 | 79695 | 218885_s_at | -1.3863 | 0.0000 | |
| GSE26886 | GALNT12 | 79695 | 218885_s_at | -3.6644 | 0.0000 | |
| GSE29001 | GALNT12 | 79695 | 218885_s_at | -2.5971 | 0.0020 | |
| GSE38129 | GALNT12 | 79695 | 218885_s_at | -2.3619 | 0.0000 | |
| GSE45670 | GALNT12 | 79695 | 218885_s_at | -1.7445 | 0.0006 | |
| GSE53622 | GALNT12 | 79695 | 167520 | -2.5014 | 0.0000 | |
| GSE53624 | GALNT12 | 79695 | 167520 | -2.5352 | 0.0000 | |
| GSE63941 | GALNT12 | 79695 | 218885_s_at | 0.3284 | 0.8338 | |
| GSE77861 | GALNT12 | 79695 | 218885_s_at | -2.1286 | 0.0007 | |
| GSE97050 | GALNT12 | 79695 | A_23_P415652 | -0.7179 | 0.0969 | |
| SRP007169 | GALNT12 | 79695 | RNAseq | -2.1928 | 0.0003 | |
| SRP008496 | GALNT12 | 79695 | RNAseq | -2.2489 | 0.0000 | |
| SRP064894 | GALNT12 | 79695 | RNAseq | -1.6678 | 0.0000 | |
| SRP133303 | GALNT12 | 79695 | RNAseq | -2.0301 | 0.0000 | |
| SRP159526 | GALNT12 | 79695 | RNAseq | -2.1456 | 0.0000 | |
| SRP193095 | GALNT12 | 79695 | RNAseq | -1.9944 | 0.0000 | |
| SRP219564 | GALNT12 | 79695 | RNAseq | -1.7376 | 0.0008 | |
| TCGA | GALNT12 | 79695 | RNAseq | -0.8378 | 0.0000 |
Upregulated datasets: 0; Downregulated datasets: 16.
Survival by GALNT12 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of GALNT12:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | GALNT12 | 79695 | 5 | 9 | 16 | |
| GSE20123 | GALNT12 | 79695 | 5 | 8 | 17 | |
| GSE43470 | GALNT12 | 79695 | 6 | 3 | 34 | |
| GSE46452 | GALNT12 | 79695 | 6 | 13 | 40 | |
| GSE47630 | GALNT12 | 79695 | 1 | 17 | 22 | |
| GSE54993 | GALNT12 | 79695 | 3 | 3 | 64 | |
| GSE54994 | GALNT12 | 79695 | 8 | 11 | 34 | |
| GSE60625 | GALNT12 | 79695 | 0 | 0 | 11 | |
| GSE74703 | GALNT12 | 79695 | 5 | 3 | 28 | |
| GSE74704 | GALNT12 | 79695 | 3 | 5 | 12 | |
| TCGA | GALNT12 | 79695 | 27 | 22 | 47 |
Total number of gains: 69; Total number of losses: 94; Total Number of normals: 325.
Somatic mutations of GALNT12:
Generating mutation plots.
Highly correlated genes for GALNT12:
Showing top 20/1896 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| GALNT12 | GBP6 | 0.861168 | 4 | 0 | 4 |
| GALNT12 | CTTNBP2 | 0.847674 | 6 | 0 | 6 |
| GALNT12 | FAM3B | 0.838414 | 6 | 0 | 6 |
| GALNT12 | SH3BGRL2 | 0.837832 | 8 | 0 | 8 |
| GALNT12 | RMND5B | 0.833172 | 11 | 0 | 11 |
| GALNT12 | MPP7 | 0.831125 | 7 | 0 | 7 |
| GALNT12 | SASH1 | 0.828388 | 11 | 0 | 11 |
| GALNT12 | SNORA68 | 0.825194 | 4 | 0 | 4 |
| GALNT12 | C5orf66-AS1 | 0.822956 | 6 | 0 | 6 |
| GALNT12 | SIM2 | 0.821513 | 11 | 0 | 11 |
| GALNT12 | MGST2 | 0.821249 | 12 | 0 | 12 |
| GALNT12 | FAM3D | 0.814261 | 7 | 0 | 7 |
| GALNT12 | UBL3 | 0.809756 | 11 | 0 | 11 |
| GALNT12 | SFTA2 | 0.806252 | 4 | 0 | 4 |
| GALNT12 | FAM214A | 0.805584 | 6 | 0 | 6 |
| GALNT12 | ACPP | 0.804984 | 10 | 0 | 10 |
| GALNT12 | CPEB3 | 0.803176 | 10 | 0 | 10 |
| GALNT12 | MGLL | 0.802411 | 11 | 0 | 11 |
| GALNT12 | GPD1L | 0.801404 | 12 | 0 | 11 |
| GALNT12 | EPHX2 | 0.799504 | 10 | 0 | 10 |
For details and further investigation, click here
