| Full name: GATA3 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 10p14 | ||
| Entrez ID: 399717 | HGNC ID: HGNC:33786 | Ensembl Gene: ENSG00000197308 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of GATA3-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | GATA3-AS1 | 399717 | 240827_at | -0.0551 | 0.8648 | |
| GSE26886 | GATA3-AS1 | 399717 | 240827_at | 0.2718 | 0.0474 | |
| GSE45670 | GATA3-AS1 | 399717 | 240827_at | -0.0592 | 0.5600 | |
| GSE53622 | GATA3-AS1 | 399717 | 53487 | 0.3420 | 0.0000 | |
| GSE53624 | GATA3-AS1 | 399717 | 53487 | 0.5804 | 0.0000 | |
| GSE63941 | GATA3-AS1 | 399717 | 240827_at | 0.2522 | 0.0899 | |
| GSE77861 | GATA3-AS1 | 399717 | 240827_at | -0.0163 | 0.9291 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by GATA3-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of GATA3-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | GATA3-AS1 | 399717 | 4 | 8 | 18 | |
| GSE20123 | GATA3-AS1 | 399717 | 4 | 7 | 19 | |
| GSE43470 | GATA3-AS1 | 399717 | 3 | 6 | 34 | |
| GSE46452 | GATA3-AS1 | 399717 | 2 | 14 | 43 | |
| GSE47630 | GATA3-AS1 | 399717 | 5 | 15 | 20 | |
| GSE54993 | GATA3-AS1 | 399717 | 11 | 0 | 59 | |
| GSE54994 | GATA3-AS1 | 399717 | 4 | 10 | 39 | |
| GSE60625 | GATA3-AS1 | 399717 | 0 | 0 | 11 | |
| GSE74703 | GATA3-AS1 | 399717 | 2 | 4 | 30 | |
| GSE74704 | GATA3-AS1 | 399717 | 1 | 6 | 13 |
Total number of gains: 36; Total number of losses: 70; Total Number of normals: 286.
Somatic mutations of GATA3-AS1:
Generating mutation plots.
Highly correlated genes for GATA3-AS1:
Showing top 20/62 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| GATA3-AS1 | KRTAP1-1 | 0.697113 | 3 | 0 | 3 |
| GATA3-AS1 | DPYSL5 | 0.685675 | 3 | 0 | 3 |
| GATA3-AS1 | CTRC | 0.68007 | 3 | 0 | 3 |
| GATA3-AS1 | SLC22A12 | 0.660377 | 3 | 0 | 3 |
| GATA3-AS1 | GPR32 | 0.649263 | 3 | 0 | 3 |
| GATA3-AS1 | ROPN1L | 0.647965 | 3 | 0 | 3 |
| GATA3-AS1 | MUC2 | 0.645375 | 3 | 0 | 3 |
| GATA3-AS1 | CELF2-AS1 | 0.629926 | 3 | 0 | 3 |
| GATA3-AS1 | PRORY | 0.625119 | 4 | 0 | 4 |
| GATA3-AS1 | VSX1 | 0.618845 | 3 | 0 | 3 |
| GATA3-AS1 | GSX1 | 0.612503 | 5 | 0 | 4 |
| GATA3-AS1 | GFRA4 | 0.609198 | 5 | 0 | 4 |
| GATA3-AS1 | CRYBA1 | 0.607838 | 3 | 0 | 3 |
| GATA3-AS1 | TNFRSF4 | 0.602725 | 5 | 0 | 3 |
| GATA3-AS1 | UCN3 | 0.600461 | 3 | 0 | 3 |
| GATA3-AS1 | TMEM26 | 0.600136 | 4 | 0 | 3 |
| GATA3-AS1 | HORMAD2 | 0.598357 | 4 | 0 | 3 |
| GATA3-AS1 | C4orf17 | 0.597342 | 3 | 0 | 3 |
| GATA3-AS1 | DNAI2 | 0.594629 | 4 | 0 | 3 |
| GATA3-AS1 | FCRL2 | 0.594328 | 3 | 0 | 3 |
For details and further investigation, click here
