| Full name: GS homeobox 1 | Alias Symbol: Gsh-1 | ||
| Type: protein-coding gene | Cytoband: 13q12.2 | ||
| Entrez ID: 219409 | HGNC ID: HGNC:20374 | Ensembl Gene: ENSG00000169840 | OMIM ID: 616542 |
Expression of GSX1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | GSX1 | 219409 | 234791_at | -0.0944 | 0.7676 | |
| GSE26886 | GSX1 | 219409 | 234791_at | 0.2089 | 0.2550 | |
| GSE45670 | GSX1 | 219409 | 1555676_s_at | -0.0183 | 0.8913 | |
| GSE53622 | GSX1 | 219409 | 31788 | 0.1875 | 0.0149 | |
| GSE53624 | GSX1 | 219409 | 31788 | 0.4405 | 0.0019 | |
| GSE63941 | GSX1 | 219409 | 234791_at | 0.2551 | 0.1330 | |
| GSE77861 | GSX1 | 219409 | 234791_at | -0.0063 | 0.9765 | |
| GSE97050 | GSX1 | 219409 | A_32_P470728 | -0.1645 | 0.5502 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by GSX1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of GSX1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | GSX1 | 219409 | 1 | 13 | 16 | |
| GSE20123 | GSX1 | 219409 | 1 | 12 | 17 | |
| GSE43470 | GSX1 | 219409 | 2 | 12 | 29 | |
| GSE46452 | GSX1 | 219409 | 0 | 33 | 26 | |
| GSE47630 | GSX1 | 219409 | 3 | 26 | 11 | |
| GSE54993 | GSX1 | 219409 | 11 | 2 | 57 | |
| GSE54994 | GSX1 | 219409 | 1 | 13 | 39 | |
| GSE60625 | GSX1 | 219409 | 0 | 3 | 8 | |
| GSE74703 | GSX1 | 219409 | 2 | 9 | 25 | |
| GSE74704 | GSX1 | 219409 | 0 | 10 | 10 | |
| TCGA | GSX1 | 219409 | 7 | 39 | 50 |
Total number of gains: 28; Total number of losses: 172; Total Number of normals: 288.
Somatic mutations of GSX1:
Generating mutation plots.
Highly correlated genes for GSX1:
Showing top 20/323 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| GSX1 | PACS2 | 0.7679 | 3 | 0 | 3 |
| GSX1 | SEC31B | 0.763302 | 3 | 0 | 3 |
| GSX1 | CAMK2N2 | 0.761334 | 3 | 0 | 3 |
| GSX1 | PLXNB3 | 0.759359 | 3 | 0 | 3 |
| GSX1 | ROPN1L | 0.750327 | 3 | 0 | 3 |
| GSX1 | GLRA2 | 0.748806 | 4 | 0 | 4 |
| GSX1 | LGI2 | 0.73955 | 3 | 0 | 3 |
| GSX1 | ELMO1 | 0.736703 | 3 | 0 | 3 |
| GSX1 | PRB4 | 0.734121 | 4 | 0 | 4 |
| GSX1 | RNF214 | 0.730258 | 3 | 0 | 3 |
| GSX1 | GFRA3 | 0.727921 | 3 | 0 | 3 |
| GSX1 | TSPAN18 | 0.727608 | 3 | 0 | 3 |
| GSX1 | PAPPA2 | 0.724714 | 3 | 0 | 3 |
| GSX1 | BARHL1 | 0.720392 | 4 | 0 | 4 |
| GSX1 | CSF3R | 0.719098 | 4 | 0 | 4 |
| GSX1 | C10orf82 | 0.718221 | 3 | 0 | 3 |
| GSX1 | SOX10 | 0.716217 | 4 | 0 | 3 |
| GSX1 | IGDCC3 | 0.715311 | 4 | 0 | 4 |
| GSX1 | MKNK1-AS1 | 0.714865 | 3 | 0 | 3 |
| GSX1 | ACSBG1 | 0.713707 | 3 | 0 | 3 |
For details and further investigation, click here
