GPATCH11

 

Full name: G-patch domain containing 11 Alias Symbol: FLJ38348|CENPY|CENP-Y
Type: protein-coding gene Cytoband: 2p22.2
Entrez ID: 253635 HGNC ID: HGNC:26768 Ensembl Gene: ENSG00000152133 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of GPATCH11:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GPATCH11 253635 228495_at 0.0206 0.9746
GSE26886 GPATCH11 253635 228495_at -0.0208 0.9342
GSE45670 GPATCH11 253635 228495_at 0.1429 0.2530
GSE53622 GPATCH11 253635 12501 0.1951 0.0285
GSE53624 GPATCH11 253635 12501 0.5189 0.0000
GSE63941 GPATCH11 253635 228495_at -0.1508 0.8181
GSE77861 GPATCH11 253635 228495_at -0.0071 0.9748
SRP007169 GPATCH11 253635 RNAseq 1.2084 0.0254
SRP008496 GPATCH11 253635 RNAseq 1.2899 0.0020
SRP064894 GPATCH11 253635 RNAseq 0.0506 0.7669
SRP133303 GPATCH11 253635 RNAseq 0.4856 0.0003
SRP159526 GPATCH11 253635 RNAseq 0.2047 0.4048
SRP193095 GPATCH11 253635 RNAseq 0.0248 0.7932
SRP219564 GPATCH11 253635 RNAseq 0.1887 0.4985

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by GPATCH11 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of GPATCH11:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GPATCH11 253635 10 1 19
GSE20123 GPATCH11 253635 9 1 20
GSE43470 GPATCH11 253635 3 0 40
GSE46452 GPATCH11 253635 1 4 54
GSE47630 GPATCH11 253635 7 0 33
GSE54993 GPATCH11 253635 0 5 65
GSE54994 GPATCH11 253635 10 0 43
GSE60625 GPATCH11 253635 0 3 8
GSE74703 GPATCH11 253635 3 0 33
GSE74704 GPATCH11 253635 9 1 10
TCGA GPATCH11 253635 35 2 59

Total number of gains: 87; Total number of losses: 17; Total Number of normals: 384.  


 

Somatic mutations of GPATCH11:

 

Generating mutation plots.

 

Highly correlated genes for GPATCH11:

 

Showing all 17 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GPATCH11C21orf910.69461303
GPATCH11PRCP0.6579303
GPATCH11PALB20.629683303
GPATCH11RMDN30.622603303
GPATCH11ANKEF10.619079303
GPATCH11BIRC60.606721303
GPATCH11HARBI10.599547403
GPATCH11ACTR30.597992303
GPATCH11ACER30.594636303
GPATCH11FBXO110.59141503
GPATCH11GPN10.574496603
GPATCH11GDPGP10.567011303
GPATCH11PPM1G0.551471503
GPATCH11COX180.544052303
GPATCH11TTF20.514559603
GPATCH11VAMP70.509732403
GPATCH11GEMIN60.507644503

For details and further investigation, click here