HBD

 

Full name: hemoglobin subunit delta Alias Symbol: 
Type: protein-coding gene Cytoband: 11p15.4
Entrez ID: 3045 HGNC ID: HGNC:4829 Ensembl Gene: ENSG00000223609 OMIM ID: 142000
Drug and gene relationship at DGIdb

 

Expression of HBD:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HBD 3045 206834_at -0.0296 0.9392
GSE20347 HBD 3045 206834_at -0.1738 0.0586
GSE23400 HBD 3045 206834_at -0.1329 0.0039
GSE26886 HBD 3045 206834_at 0.0072 0.9674
GSE29001 HBD 3045 206834_at -0.2501 0.0657
GSE38129 HBD 3045 206834_at -0.3511 0.0007
GSE45670 HBD 3045 206834_at -0.1182 0.4696
GSE53622 HBD 3045 60120 -1.7748 0.0000
GSE53624 HBD 3045 60120 -1.5852 0.0000
GSE63941 HBD 3045 206834_at -0.7379 0.0005
GSE77861 HBD 3045 206834_at 0.0775 0.6253
GSE97050 HBD 3045 A_24_P75190 -1.2020 0.1496

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by HBD expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HBD:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HBD 3045 1 11 18
GSE20123 HBD 3045 1 11 18
GSE43470 HBD 3045 1 8 34
GSE46452 HBD 3045 7 8 44
GSE47630 HBD 3045 3 13 24
GSE54993 HBD 3045 3 1 66
GSE54994 HBD 3045 2 12 39
GSE60625 HBD 3045 0 0 11
GSE74703 HBD 3045 1 6 29
GSE74704 HBD 3045 0 8 12
TCGA HBD 3045 8 39 49

Total number of gains: 27; Total number of losses: 117; Total Number of normals: 344.  


 

Somatic mutations of HBD:

 

Generating mutation plots.

 

Highly correlated genes for HBD:

 

Showing top 20/460 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HBDHBA20.941017303
HBDSCARB20.736736303
HBDANTXR20.71661303
HBDTMTC10.715225303
HBDDOK60.701888303
HBDCALD10.700553303
HBDCYP21A20.697111303
HBDDCN0.689665403
HBDLGALS130.685947303
HBDSSTR40.680627303
HBDHEPH0.679886303
HBDCOL15A10.678945303
HBDCLEC3B0.678494303
HBDOR2H20.677171303
HBDNEGR10.675595404
HBDZNF3820.673344303
HBDS100G0.668407404
HBDZNF5210.668205303
HBDABCB80.664676303
HBDBICC10.664613403

For details and further investigation, click here