| Full name: HLA complex group 27 | Alias Symbol: bPG299F13.9|bCX101P6.9|bQB115I13.2|FLJ40123 | ||
| Type: non-coding RNA | Cytoband: 6p21.33 | ||
| Entrez ID: 253018 | HGNC ID: HGNC:27366 | Ensembl Gene: ENSG00000206344 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of HCG27:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HCG27 | 253018 | 1559050_at | 0.0341 | 0.9491 | |
| GSE26886 | HCG27 | 253018 | 1559050_at | -0.0191 | 0.8932 | |
| GSE45670 | HCG27 | 253018 | 1559050_at | -0.3455 | 0.0295 | |
| GSE53622 | HCG27 | 253018 | 65293 | -1.1812 | 0.0000 | |
| GSE53624 | HCG27 | 253018 | 65293 | -1.8956 | 0.0000 | |
| GSE63941 | HCG27 | 253018 | 1559050_at | 0.3404 | 0.1448 | |
| GSE77861 | HCG27 | 253018 | 1559050_at | -0.2049 | 0.0472 | |
| SRP064894 | HCG27 | 253018 | RNAseq | 0.0064 | 0.9852 | |
| SRP133303 | HCG27 | 253018 | RNAseq | -0.3042 | 0.2745 | |
| SRP159526 | HCG27 | 253018 | RNAseq | 0.0274 | 0.9598 | |
| SRP219564 | HCG27 | 253018 | RNAseq | -0.2052 | 0.6463 | |
| TCGA | HCG27 | 253018 | RNAseq | -0.2524 | 0.3958 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by HCG27 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of HCG27:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HCG27 | 253018 | 5 | 1 | 24 | |
| GSE20123 | HCG27 | 253018 | 5 | 1 | 24 | |
| GSE43470 | HCG27 | 253018 | 5 | 1 | 37 | |
| GSE46452 | HCG27 | 253018 | 1 | 10 | 48 | |
| GSE47630 | HCG27 | 253018 | 7 | 3 | 30 | |
| GSE54993 | HCG27 | 253018 | 2 | 1 | 67 | |
| GSE54994 | HCG27 | 253018 | 11 | 4 | 38 | |
| GSE60625 | HCG27 | 253018 | 0 | 1 | 10 | |
| GSE74703 | HCG27 | 253018 | 5 | 0 | 31 | |
| GSE74704 | HCG27 | 253018 | 2 | 0 | 18 | |
| TCGA | HCG27 | 253018 | 16 | 16 | 64 |
Total number of gains: 59; Total number of losses: 38; Total Number of normals: 391.
Somatic mutations of HCG27:
Generating mutation plots.
Highly correlated genes for HCG27:
Showing top 20/148 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HCG27 | LINC00528 | 0.772071 | 3 | 0 | 3 |
| HCG27 | CYP11A1 | 0.725985 | 3 | 0 | 3 |
| HCG27 | PLD2 | 0.717769 | 3 | 0 | 3 |
| HCG27 | FSHR | 0.716273 | 4 | 0 | 3 |
| HCG27 | ANKRD24 | 0.702386 | 3 | 0 | 3 |
| HCG27 | ATP8A1 | 0.688306 | 3 | 0 | 3 |
| HCG27 | ATP10B | 0.685849 | 3 | 0 | 3 |
| HCG27 | DHRS1 | 0.673443 | 3 | 0 | 3 |
| HCG27 | KAZN | 0.667272 | 3 | 0 | 3 |
| HCG27 | ZNF185 | 0.663915 | 3 | 0 | 3 |
| HCG27 | CTSS | 0.662846 | 4 | 0 | 4 |
| HCG27 | GPR157 | 0.660714 | 3 | 0 | 3 |
| HCG27 | LINC01214 | 0.65745 | 3 | 0 | 3 |
| HCG27 | GPR62 | 0.656911 | 4 | 0 | 3 |
| HCG27 | CTNNBIP1 | 0.651718 | 4 | 0 | 3 |
| HCG27 | TMEM40 | 0.651299 | 4 | 0 | 3 |
| HCG27 | BARX2 | 0.650858 | 4 | 0 | 4 |
| HCG27 | PALMD | 0.648292 | 3 | 0 | 3 |
| HCG27 | GYS2 | 0.643272 | 3 | 0 | 3 |
| HCG27 | SPATA19 | 0.643069 | 3 | 0 | 3 |
For details and further investigation, click here
