| Full name: long intergenic non-protein coding RNA 528 | Alias Symbol: FLJ40542 | ||
| Type: non-coding RNA | Cytoband: 22q11.21 | ||
| Entrez ID: 200298 | HGNC ID: HGNC:26875 | Ensembl Gene: ENSG00000269220 | OMIM ID: |
Expression of LINC00528:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00528 | 200298 | 1556072_at | 0.0025 | 0.9959 | |
| GSE26886 | LINC00528 | 200298 | 1556072_at | 0.5023 | 0.0043 | |
| GSE45670 | LINC00528 | 200298 | 1556072_at | 0.1079 | 0.3851 | |
| GSE53622 | LINC00528 | 200298 | 44052 | -1.0281 | 0.0000 | |
| GSE53624 | LINC00528 | 200298 | 44052 | -1.7081 | 0.0000 | |
| GSE63941 | LINC00528 | 200298 | 1556072_at | 0.2179 | 0.0680 | |
| GSE77861 | LINC00528 | 200298 | 1556072_at | 0.0083 | 0.9325 | |
| SRP133303 | LINC00528 | 200298 | RNAseq | 0.2800 | 0.1690 | |
| SRP159526 | LINC00528 | 200298 | RNAseq | -0.6396 | 0.2409 | |
| SRP193095 | LINC00528 | 200298 | RNAseq | 0.3960 | 0.0069 | |
| SRP219564 | LINC00528 | 200298 | RNAseq | 0.5564 | 0.2479 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by LINC00528 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00528:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00528 | 200298 | 4 | 7 | 19 | |
| GSE20123 | LINC00528 | 200298 | 4 | 7 | 19 | |
| GSE43470 | LINC00528 | 200298 | 5 | 7 | 31 | |
| GSE46452 | LINC00528 | 200298 | 32 | 2 | 25 | |
| GSE47630 | LINC00528 | 200298 | 8 | 5 | 27 | |
| GSE54993 | LINC00528 | 200298 | 3 | 6 | 61 | |
| GSE54994 | LINC00528 | 200298 | 12 | 7 | 34 | |
| GSE60625 | LINC00528 | 200298 | 5 | 0 | 6 | |
| GSE74703 | LINC00528 | 200298 | 5 | 5 | 26 | |
| GSE74704 | LINC00528 | 200298 | 2 | 4 | 14 | |
| TCGA | LINC00528 | 200298 | 24 | 17 | 55 |
Total number of gains: 104; Total number of losses: 67; Total Number of normals: 317.
Somatic mutations of LINC00528:
Generating mutation plots.
Highly correlated genes for LINC00528:
Showing top 20/51 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00528 | HCG27 | 0.772071 | 3 | 0 | 3 |
| LINC00528 | ARID5A | 0.696708 | 3 | 0 | 3 |
| LINC00528 | FAM178B | 0.666264 | 3 | 0 | 3 |
| LINC00528 | FSHR | 0.663566 | 3 | 0 | 3 |
| LINC00528 | C7orf57 | 0.656557 | 3 | 0 | 3 |
| LINC00528 | MORN3 | 0.643554 | 3 | 0 | 3 |
| LINC00528 | LEP | 0.639623 | 3 | 0 | 3 |
| LINC00528 | S100A11 | 0.639424 | 3 | 0 | 3 |
| LINC00528 | LINC00567 | 0.636616 | 3 | 0 | 3 |
| LINC00528 | KLK8 | 0.629648 | 3 | 0 | 3 |
| LINC00528 | SYT12 | 0.629226 | 3 | 0 | 3 |
| LINC00528 | ZBTB7B | 0.62539 | 4 | 0 | 3 |
| LINC00528 | PRRG2 | 0.616937 | 3 | 0 | 3 |
| LINC00528 | LTB4R2 | 0.611552 | 3 | 0 | 3 |
| LINC00528 | AGER | 0.608348 | 3 | 0 | 3 |
| LINC00528 | SUGCT | 0.603106 | 3 | 0 | 3 |
| LINC00528 | NHLRC4 | 0.602194 | 4 | 0 | 3 |
| LINC00528 | PEX16 | 0.601228 | 4 | 0 | 4 |
| LINC00528 | ANKRD24 | 0.590517 | 5 | 0 | 3 |
| LINC00528 | CRTC1 | 0.585755 | 3 | 0 | 3 |
For details and further investigation, click here
