| Full name: palmdelphin | Alias Symbol: FLJ20271|PALML | ||
| Type: protein-coding gene | Cytoband: 1p21.2 | ||
| Entrez ID: 54873 | HGNC ID: HGNC:15846 | Ensembl Gene: ENSG00000099260 | OMIM ID: 610182 |
| Drug and gene relationship at DGIdb | |||
Expression of PALMD:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PALMD | 54873 | 218736_s_at | -1.2387 | 0.2256 | |
| GSE20347 | PALMD | 54873 | 218736_s_at | -2.4036 | 0.0000 | |
| GSE23400 | PALMD | 54873 | 218736_s_at | -0.9345 | 0.0000 | |
| GSE26886 | PALMD | 54873 | 218736_s_at | -1.3172 | 0.0009 | |
| GSE29001 | PALMD | 54873 | 218736_s_at | -1.6541 | 0.0031 | |
| GSE38129 | PALMD | 54873 | 218736_s_at | -1.8793 | 0.0000 | |
| GSE45670 | PALMD | 54873 | 218736_s_at | -0.8645 | 0.0079 | |
| GSE53622 | PALMD | 54873 | 1780 | -1.6498 | 0.0000 | |
| GSE53624 | PALMD | 54873 | 1780 | -1.6799 | 0.0000 | |
| GSE63941 | PALMD | 54873 | 218736_s_at | 0.6862 | 0.6579 | |
| GSE77861 | PALMD | 54873 | 218736_s_at | -1.2383 | 0.0339 | |
| GSE97050 | PALMD | 54873 | A_23_P23669 | -0.6026 | 0.0970 | |
| SRP007169 | PALMD | 54873 | RNAseq | -2.2170 | 0.0006 | |
| SRP008496 | PALMD | 54873 | RNAseq | -1.7357 | 0.0000 | |
| SRP064894 | PALMD | 54873 | RNAseq | -0.8639 | 0.0016 | |
| SRP133303 | PALMD | 54873 | RNAseq | -1.6945 | 0.0000 | |
| SRP159526 | PALMD | 54873 | RNAseq | -1.8493 | 0.0000 | |
| SRP193095 | PALMD | 54873 | RNAseq | -0.7706 | 0.0172 | |
| SRP219564 | PALMD | 54873 | RNAseq | -0.7789 | 0.1529 | |
| TCGA | PALMD | 54873 | RNAseq | -0.0186 | 0.8838 |
Upregulated datasets: 0; Downregulated datasets: 11.
Survival by PALMD expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PALMD:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PALMD | 54873 | 0 | 10 | 20 | |
| GSE20123 | PALMD | 54873 | 0 | 10 | 20 | |
| GSE43470 | PALMD | 54873 | 1 | 5 | 37 | |
| GSE46452 | PALMD | 54873 | 1 | 1 | 57 | |
| GSE47630 | PALMD | 54873 | 9 | 5 | 26 | |
| GSE54993 | PALMD | 54873 | 0 | 1 | 69 | |
| GSE54994 | PALMD | 54873 | 6 | 3 | 44 | |
| GSE60625 | PALMD | 54873 | 0 | 0 | 11 | |
| GSE74703 | PALMD | 54873 | 0 | 4 | 32 | |
| GSE74704 | PALMD | 54873 | 0 | 6 | 14 | |
| TCGA | PALMD | 54873 | 8 | 24 | 64 |
Total number of gains: 25; Total number of losses: 69; Total Number of normals: 394.
Somatic mutations of PALMD:
Generating mutation plots.
Highly correlated genes for PALMD:
Showing top 20/1441 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PALMD | AKIP1 | 0.780733 | 3 | 0 | 3 |
| PALMD | GANC | 0.77554 | 7 | 0 | 7 |
| PALMD | PDLIM2 | 0.773773 | 9 | 0 | 9 |
| PALMD | GNG12 | 0.773219 | 10 | 0 | 10 |
| PALMD | ARGLU1 | 0.7702 | 3 | 0 | 3 |
| PALMD | CCNYL1 | 0.765686 | 5 | 0 | 5 |
| PALMD | RSPH3 | 0.762072 | 4 | 0 | 4 |
| PALMD | SPINK5 | 0.754902 | 9 | 0 | 9 |
| PALMD | CDX1 | 0.751406 | 3 | 0 | 3 |
| PALMD | FCHO2 | 0.749971 | 7 | 0 | 7 |
| PALMD | CAST | 0.746328 | 11 | 0 | 11 |
| PALMD | RAB18 | 0.740659 | 4 | 0 | 4 |
| PALMD | RHCG | 0.739923 | 9 | 0 | 9 |
| PALMD | CWH43 | 0.73697 | 10 | 0 | 10 |
| PALMD | HIGD1A | 0.736844 | 10 | 0 | 10 |
| PALMD | DOCK9 | 0.736822 | 11 | 0 | 10 |
| PALMD | TMPRSS11E | 0.736454 | 9 | 0 | 9 |
| PALMD | A2ML1 | 0.734372 | 5 | 0 | 5 |
| PALMD | CYSRT1 | 0.730666 | 6 | 0 | 5 |
| PALMD | CRNN | 0.730264 | 9 | 0 | 9 |
For details and further investigation, click here
