| Full name: high mobility group nucleosome binding domain 5 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: Xq21.1 | ||
| Entrez ID: 79366 | HGNC ID: HGNC:8013 | Ensembl Gene: ENSG00000198157 | OMIM ID: 300385 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of HMGN5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HMGN5 | 79366 | 221606_s_at | -1.4720 | 0.1907 | |
| GSE20347 | HMGN5 | 79366 | 221606_s_at | -0.9603 | 0.0060 | |
| GSE23400 | HMGN5 | 79366 | 221238_at | -0.0995 | 0.0005 | |
| GSE26886 | HMGN5 | 79366 | 221606_s_at | -2.7579 | 0.0000 | |
| GSE29001 | HMGN5 | 79366 | 221238_at | -0.0161 | 0.9256 | |
| GSE38129 | HMGN5 | 79366 | 221606_s_at | -1.1837 | 0.0000 | |
| GSE45670 | HMGN5 | 79366 | 221606_s_at | -1.1192 | 0.0156 | |
| GSE53622 | HMGN5 | 79366 | 3588 | -1.5108 | 0.0000 | |
| GSE53624 | HMGN5 | 79366 | 3588 | -1.3467 | 0.0000 | |
| GSE63941 | HMGN5 | 79366 | 221606_s_at | -1.5907 | 0.2593 | |
| GSE77861 | HMGN5 | 79366 | 221606_s_at | -1.5116 | 0.0013 | |
| GSE97050 | HMGN5 | 79366 | A_23_P136909 | -0.6369 | 0.1906 | |
| SRP064894 | HMGN5 | 79366 | RNAseq | -0.9199 | 0.0002 | |
| SRP133303 | HMGN5 | 79366 | RNAseq | -1.4850 | 0.0000 | |
| SRP159526 | HMGN5 | 79366 | RNAseq | -0.2135 | 0.7724 | |
| SRP193095 | HMGN5 | 79366 | RNAseq | -1.2109 | 0.0000 | |
| SRP219564 | HMGN5 | 79366 | RNAseq | -1.5916 | 0.0025 | |
| TCGA | HMGN5 | 79366 | RNAseq | -0.7952 | 0.0001 |
Upregulated datasets: 0; Downregulated datasets: 9.
Survival by HMGN5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of HMGN5:
No record found for this gene.
Somatic mutations of HMGN5:
Generating mutation plots.
Highly correlated genes for HMGN5:
Showing top 20/1296 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HMGN5 | ZNF416 | 0.798592 | 3 | 0 | 3 |
| HMGN5 | KLHL9 | 0.782733 | 3 | 0 | 3 |
| HMGN5 | PCBP1-AS1 | 0.756804 | 3 | 0 | 3 |
| HMGN5 | SNORA68 | 0.754995 | 4 | 0 | 4 |
| HMGN5 | SH3BGRL | 0.744113 | 10 | 0 | 10 |
| HMGN5 | ATP6V1C2 | 0.735898 | 3 | 0 | 3 |
| HMGN5 | TMEM45B | 0.733736 | 3 | 0 | 3 |
| HMGN5 | CGNL1 | 0.732102 | 7 | 0 | 7 |
| HMGN5 | INSRR | 0.729982 | 3 | 0 | 3 |
| HMGN5 | ZNF547 | 0.728287 | 3 | 0 | 3 |
| HMGN5 | CHM | 0.727386 | 4 | 0 | 4 |
| HMGN5 | GALNT11 | 0.724639 | 3 | 0 | 3 |
| HMGN5 | PRICKLE2 | 0.716086 | 3 | 0 | 3 |
| HMGN5 | ZCCHC10 | 0.713296 | 3 | 0 | 3 |
| HMGN5 | GBP6 | 0.710795 | 4 | 0 | 4 |
| HMGN5 | CYP21A2 | 0.709807 | 3 | 0 | 3 |
| HMGN5 | TP53AIP1 | 0.707586 | 3 | 0 | 3 |
| HMGN5 | LRRC20 | 0.705525 | 4 | 0 | 4 |
| HMGN5 | RBM20 | 0.704361 | 5 | 0 | 5 |
| HMGN5 | HDHD2 | 0.704107 | 6 | 0 | 5 |
For details and further investigation, click here
