| Full name: HOXB cluster antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 17q21.32 | ||
| Entrez ID: 100874362 | HGNC ID: HGNC:43744 | Ensembl Gene: ENSG00000230148 | OMIM ID: 618066 |
| Drug and gene relationship at DGIdb | |||
Expression of HOXB-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HOXB-AS1 | 100874362 | 244512_at | 0.2386 | 0.5325 | |
| GSE26886 | HOXB-AS1 | 100874362 | 244512_at | 0.1351 | 0.2975 | |
| GSE45670 | HOXB-AS1 | 100874362 | 237189_at | 0.1906 | 0.5750 | |
| GSE63941 | HOXB-AS1 | 100874362 | 244512_at | 0.0388 | 0.9345 | |
| GSE77861 | HOXB-AS1 | 100874362 | 244512_at | -0.0812 | 0.5804 | |
| SRP064894 | HOXB-AS1 | 100874362 | RNAseq | 0.9970 | 0.0030 | |
| SRP133303 | HOXB-AS1 | 100874362 | RNAseq | 0.1904 | 0.4203 | |
| SRP159526 | HOXB-AS1 | 100874362 | RNAseq | 0.5062 | 0.1520 | |
| SRP219564 | HOXB-AS1 | 100874362 | RNAseq | -0.0292 | 0.9557 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of HOXB-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HOXB-AS1 | 100874362 | 5 | 2 | 23 | |
| GSE20123 | HOXB-AS1 | 100874362 | 5 | 2 | 23 | |
| GSE43470 | HOXB-AS1 | 100874362 | 3 | 1 | 39 | |
| GSE46452 | HOXB-AS1 | 100874362 | 32 | 0 | 27 | |
| GSE47630 | HOXB-AS1 | 100874362 | 9 | 0 | 31 | |
| GSE54993 | HOXB-AS1 | 100874362 | 2 | 4 | 64 | |
| GSE54994 | HOXB-AS1 | 100874362 | 10 | 6 | 37 | |
| GSE60625 | HOXB-AS1 | 100874362 | 4 | 0 | 7 | |
| GSE74703 | HOXB-AS1 | 100874362 | 3 | 1 | 32 | |
| GSE74704 | HOXB-AS1 | 100874362 | 4 | 1 | 15 |
Total number of gains: 77; Total number of losses: 17; Total Number of normals: 298.
Somatic mutations of HOXB-AS1:
Generating mutation plots.
Highly correlated genes for HOXB-AS1:
Showing all 18 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HOXB-AS1 | AZIN2 | 0.65935 | 3 | 0 | 3 |
| HOXB-AS1 | DPP10-AS1 | 0.651992 | 3 | 0 | 3 |
| HOXB-AS1 | HOXB5 | 0.65094 | 3 | 0 | 3 |
| HOXB-AS1 | NGB | 0.64271 | 3 | 0 | 3 |
| HOXB-AS1 | HK3 | 0.632103 | 3 | 0 | 3 |
| HOXB-AS1 | CCL27 | 0.624053 | 3 | 0 | 3 |
| HOXB-AS1 | PAEP | 0.612772 | 3 | 0 | 3 |
| HOXB-AS1 | APC2 | 0.61021 | 3 | 0 | 3 |
| HOXB-AS1 | FOXS1 | 0.578829 | 3 | 0 | 3 |
| HOXB-AS1 | CHD5 | 0.577788 | 3 | 0 | 3 |
| HOXB-AS1 | TEKT3 | 0.569182 | 3 | 0 | 3 |
| HOXB-AS1 | BIRC7 | 0.560186 | 3 | 0 | 3 |
| HOXB-AS1 | ACSF3 | 0.559819 | 3 | 0 | 3 |
| HOXB-AS1 | SNHG22 | 0.555039 | 3 | 0 | 3 |
| HOXB-AS1 | ZNF579 | 0.542065 | 3 | 0 | 3 |
| HOXB-AS1 | PDE3A | 0.54037 | 3 | 0 | 3 |
| HOXB-AS1 | TUT1 | 0.53724 | 3 | 0 | 3 |
| HOXB-AS1 | LAT | 0.530198 | 4 | 0 | 3 |
For details and further investigation, click here
