ODF3L1

 

Full name: outer dense fiber of sperm tails 3 like 1 Alias Symbol: MGC48986
Type: protein-coding gene Cytoband: 15q24.2
Entrez ID: 161753 HGNC ID: HGNC:28735 Ensembl Gene: ENSG00000182950 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ODF3L1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ODF3L1 161753 236245_at -0.0197 0.9656
GSE26886 ODF3L1 161753 236245_at 0.6941 0.0002
GSE45670 ODF3L1 161753 236245_at 0.1941 0.2658
GSE53622 ODF3L1 161753 7569 -0.4534 0.0911
GSE53624 ODF3L1 161753 7569 0.1404 0.5095
GSE63941 ODF3L1 161753 236245_at 0.0334 0.9137
GSE77861 ODF3L1 161753 236245_at 0.0706 0.6147
SRP219564 ODF3L1 161753 RNAseq 0.5333 0.6195
TCGA ODF3L1 161753 RNAseq -0.5549 0.0628

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ODF3L1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ODF3L1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ODF3L1 161753 8 1 21
GSE20123 ODF3L1 161753 8 1 21
GSE43470 ODF3L1 161753 4 6 33
GSE46452 ODF3L1 161753 3 7 49
GSE47630 ODF3L1 161753 8 10 22
GSE54993 ODF3L1 161753 5 6 59
GSE54994 ODF3L1 161753 5 6 42
GSE60625 ODF3L1 161753 4 0 7
GSE74703 ODF3L1 161753 4 3 29
GSE74704 ODF3L1 161753 4 1 15
TCGA ODF3L1 161753 14 15 67

Total number of gains: 67; Total number of losses: 56; Total Number of normals: 365.  


 

Somatic mutations of ODF3L1:

 

Generating mutation plots.

 

Highly correlated genes for ODF3L1:

 

Showing top 20/142 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ODF3L1PRM30.740824303
ODF3L1TCF7L10.694066303
ODF3L1SHOX20.692956303
ODF3L1HABP40.690019303
ODF3L1HOXB90.689115303
ODF3L1APBA30.685781303
ODF3L1HCFC1R10.683723404
ODF3L1NCAM10.676071303
ODF3L1P4HA10.668215303
ODF3L1SLC2A10.663835303
ODF3L1SIX60.663331403
ODF3L1PMEPA10.6605303
ODF3L1ITPK10.660369303
ODF3L1MLXIPL0.659805303
ODF3L1KCND30.65959303
ODF3L1ELMOD30.655595303
ODF3L1IL40.650913403
ODF3L1GRIN10.650667303
ODF3L1PRIMA10.65022303
ODF3L1HSPA12A0.649406403

For details and further investigation, click here