HPD

 

Full name: 4-hydroxyphenylpyruvate dioxygenase Alias Symbol: 4-HPPD|4HPPD|GLOD3
Type: protein-coding gene Cytoband: 12q24.31
Entrez ID: 3242 HGNC ID: HGNC:5147 Ensembl Gene: ENSG00000158104 OMIM ID: 609695
Drug and gene relationship at DGIdb

 

Expression of HPD:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HPD 3242 206024_at 0.0561 0.8804
GSE20347 HPD 3242 206024_at 0.0303 0.6391
GSE23400 HPD 3242 206024_at -0.0409 0.5209
GSE26886 HPD 3242 206024_at 0.1579 0.1064
GSE29001 HPD 3242 206024_at -0.1841 0.0595
GSE38129 HPD 3242 206024_at -0.1028 0.1206
GSE45670 HPD 3242 206024_at -0.0139 0.8776
GSE53622 HPD 3242 7711 -0.5680 0.0000
GSE53624 HPD 3242 7711 -0.5031 0.0000
GSE63941 HPD 3242 206024_at 0.2763 0.1836
GSE77861 HPD 3242 206024_at -0.0303 0.8209
GSE97050 HPD 3242 A_23_P139527 0.1044 0.5790
SRP159526 HPD 3242 RNAseq -0.4339 0.5234
TCGA HPD 3242 RNAseq -1.4640 0.0238

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by HPD expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HPD:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HPD 3242 5 4 21
GSE20123 HPD 3242 5 4 21
GSE43470 HPD 3242 2 2 39
GSE46452 HPD 3242 9 1 49
GSE47630 HPD 3242 9 3 28
GSE54993 HPD 3242 0 5 65
GSE54994 HPD 3242 6 7 40
GSE60625 HPD 3242 0 0 11
GSE74703 HPD 3242 2 1 33
GSE74704 HPD 3242 4 2 14
TCGA HPD 3242 21 10 65

Total number of gains: 63; Total number of losses: 39; Total Number of normals: 386.  


 

Somatic mutations of HPD:

 

Generating mutation plots.

 

Highly correlated genes for HPD:

 

Showing top 20/76 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HPDBTNL90.726899303
HPDLYPD40.708971303
HPDPSPN0.695085303
HPDDOK70.689489303
HPDFSIP10.663351403
HPDDPEP30.64003403
HPDTEKT20.632929403
HPDPTGDR20.630643504
HPDKLHL340.629136403
HPDDNAI10.618655403
HPDGPR170.618377605
HPDGAB20.616916403
HPDCELA3B0.61689503
HPDCLDN140.616694503
HPDDHH0.614019403
HPDFOXB10.612505504
HPDFAM186B0.611348404
HPDIFIT20.600645303
HPDATOH80.600068403
HPDMYL40.598082503

For details and further investigation, click here