HRC

 

Full name: histidine rich calcium binding protein Alias Symbol: MGC133236
Type: protein-coding gene Cytoband: 19q13.33
Entrez ID: 3270 HGNC ID: HGNC:5178 Ensembl Gene: ENSG00000130528 OMIM ID: 142705
Drug and gene relationship at DGIdb

 

Expression of HRC:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HRC 3270 207066_at -0.3207 0.2386
GSE20347 HRC 3270 207066_at -0.0237 0.7990
GSE23400 HRC 3270 207066_at -0.2340 0.0000
GSE26886 HRC 3270 207066_at -0.0595 0.5313
GSE29001 HRC 3270 207066_at -0.1575 0.2844
GSE38129 HRC 3270 207066_at -0.2660 0.0022
GSE45670 HRC 3270 207066_at -0.2753 0.0024
GSE53622 HRC 3270 46853 -0.5616 0.0000
GSE53624 HRC 3270 46853 -1.8421 0.0000
GSE63941 HRC 3270 207066_at -0.0641 0.6676
GSE77861 HRC 3270 207066_at -0.0730 0.3877
GSE97050 HRC 3270 A_23_P142125 -0.3265 0.1891
SRP133303 HRC 3270 RNAseq -0.7200 0.0045
SRP159526 HRC 3270 RNAseq -1.5959 0.0045
SRP193095 HRC 3270 RNAseq -0.1492 0.3925
SRP219564 HRC 3270 RNAseq -0.3101 0.6926
TCGA HRC 3270 RNAseq -1.6442 0.0000

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by HRC expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HRC:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HRC 3270 4 4 22
GSE20123 HRC 3270 4 3 23
GSE43470 HRC 3270 4 10 29
GSE46452 HRC 3270 45 1 13
GSE47630 HRC 3270 10 6 24
GSE54993 HRC 3270 17 4 49
GSE54994 HRC 3270 4 14 35
GSE60625 HRC 3270 9 0 2
GSE74703 HRC 3270 4 7 25
GSE74704 HRC 3270 4 1 15
TCGA HRC 3270 14 18 64

Total number of gains: 119; Total number of losses: 68; Total Number of normals: 301.  


 

Somatic mutations of HRC:

 

Generating mutation plots.

 

Highly correlated genes for HRC:

 

Showing top 20/1098 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HRCBARHL20.817261303
HRCFSIP10.812844303
HRCNPR20.809023303
HRCP2RX60.789607303
HRCOBSL10.788321303
HRCC9orf1060.778949303
HRCMEPE0.776786404
HRCGPR880.776673404
HRCOR10G80.775368303
HRCNT5C1A0.771536303
HRCCDC42EP20.769997404
HRCANGPT40.768977404
HRCPRRT20.768313303
HRCFAM163B0.767436303
HRCOR2Z10.765558303
HRCRNF1860.763768404
HRCOR10G30.7565303
HRCKRTAP5-90.751454303
HRCBRINP20.75106303
HRCOTOF0.74899606

For details and further investigation, click here