| Full name: interferon alpha 17 | Alias Symbol: LEIF2C1|IFN-alphaI | ||
| Type: protein-coding gene | Cytoband: 9p21.3 | ||
| Entrez ID: 3451 | HGNC ID: HGNC:5422 | Ensembl Gene: ENSG00000234829 | OMIM ID: 147583 |
IFNA17 involved pathways:
Expression of IFNA17:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | IFNA17 | 3451 | 211405_x_at | 0.0524 | 0.8888 | |
| GSE20347 | IFNA17 | 3451 | 211405_x_at | 0.0552 | 0.6126 | |
| GSE23400 | IFNA17 | 3451 | 211405_x_at | -0.0553 | 0.2393 | |
| GSE26886 | IFNA17 | 3451 | 211405_x_at | -0.3083 | 0.0223 | |
| GSE29001 | IFNA17 | 3451 | 211405_x_at | -0.0812 | 0.6940 | |
| GSE38129 | IFNA17 | 3451 | 211405_x_at | -0.0744 | 0.4613 | |
| GSE45670 | IFNA17 | 3451 | 211405_x_at | -0.0515 | 0.6201 | |
| GSE63941 | IFNA17 | 3451 | 211405_x_at | 0.2653 | 0.0511 | |
| GSE77861 | IFNA17 | 3451 | 211405_x_at | -0.0142 | 0.9302 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of IFNA17:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | IFNA17 | 3451 | 2 | 17 | 11 | |
| GSE20123 | IFNA17 | 3451 | 2 | 17 | 11 | |
| GSE43470 | IFNA17 | 3451 | 4 | 13 | 26 | |
| GSE46452 | IFNA17 | 3451 | 2 | 23 | 34 | |
| GSE47630 | IFNA17 | 3451 | 3 | 27 | 10 | |
| GSE54993 | IFNA17 | 3451 | 7 | 2 | 61 | |
| GSE54994 | IFNA17 | 3451 | 8 | 16 | 29 | |
| GSE60625 | IFNA17 | 3451 | 3 | 0 | 8 | |
| GSE74703 | IFNA17 | 3451 | 4 | 10 | 22 | |
| GSE74704 | IFNA17 | 3451 | 0 | 13 | 7 | |
| TCGA | IFNA17 | 3451 | 11 | 53 | 32 |
Total number of gains: 46; Total number of losses: 191; Total Number of normals: 251.
Somatic mutations of IFNA17:
Generating mutation plots.
Highly correlated genes for IFNA17:
Showing top 20/980 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| IFNA17 | KCNJ10 | 0.802023 | 4 | 0 | 4 |
| IFNA17 | KHDRBS2 | 0.795897 | 4 | 0 | 4 |
| IFNA17 | CGA | 0.779134 | 4 | 0 | 4 |
| IFNA17 | KIF5A | 0.77268 | 4 | 0 | 4 |
| IFNA17 | OR10H3 | 0.758178 | 5 | 0 | 4 |
| IFNA17 | MTAP | 0.755751 | 4 | 0 | 4 |
| IFNA17 | KIR2DS2 | 0.752901 | 4 | 0 | 4 |
| IFNA17 | UBE2D4 | 0.742684 | 4 | 0 | 4 |
| IFNA17 | HTR1F | 0.741254 | 3 | 0 | 3 |
| IFNA17 | SLC17A1 | 0.737088 | 4 | 0 | 4 |
| IFNA17 | GAD2 | 0.733867 | 5 | 0 | 5 |
| IFNA17 | MEPE | 0.733289 | 4 | 0 | 4 |
| IFNA17 | HRG | 0.732971 | 4 | 0 | 4 |
| IFNA17 | KRTAP5-8 | 0.731693 | 5 | 0 | 5 |
| IFNA17 | GP1BA | 0.729181 | 4 | 0 | 4 |
| IFNA17 | CYP3A4 | 0.727453 | 4 | 0 | 4 |
| IFNA17 | NTNG1 | 0.724363 | 4 | 0 | 4 |
| IFNA17 | KCNA1 | 0.719564 | 4 | 0 | 3 |
| IFNA17 | FOXN3-AS2 | 0.717612 | 5 | 0 | 5 |
| IFNA17 | C8A | 0.714976 | 4 | 0 | 4 |
For details and further investigation, click here
