| Full name: lysine demethylase 3B | Alias Symbol: KIAA1082|NET22 | ||
| Type: protein-coding gene | Cytoband: 5q31.2 | ||
| Entrez ID: 51780 | HGNC ID: HGNC:1337 | Ensembl Gene: ENSG00000120733 | OMIM ID: 609373 |
| Drug and gene relationship at DGIdb | |||
Expression of KDM3B:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | KDM3B | 51780 | 201643_x_at | -0.3657 | 0.0901 | |
| GSE20347 | KDM3B | 51780 | 201643_x_at | -0.1374 | 0.2506 | |
| GSE23400 | KDM3B | 51780 | 201643_x_at | -0.1119 | 0.0238 | |
| GSE26886 | KDM3B | 51780 | 201643_x_at | -0.7977 | 0.0003 | |
| GSE29001 | KDM3B | 51780 | 201643_x_at | -0.3416 | 0.1295 | |
| GSE38129 | KDM3B | 51780 | 201643_x_at | -0.1492 | 0.2188 | |
| GSE45670 | KDM3B | 51780 | 201643_x_at | -0.3123 | 0.0475 | |
| GSE53622 | KDM3B | 51780 | 37218 | -0.2689 | 0.0003 | |
| GSE53624 | KDM3B | 51780 | 37218 | -0.3109 | 0.0000 | |
| GSE63941 | KDM3B | 51780 | 210878_s_at | -0.0250 | 0.9558 | |
| GSE77861 | KDM3B | 51780 | 201643_x_at | -0.2545 | 0.3058 | |
| GSE97050 | KDM3B | 51780 | A_23_P7783 | -0.2575 | 0.3077 | |
| SRP007169 | KDM3B | 51780 | RNAseq | -0.0190 | 0.9665 | |
| SRP008496 | KDM3B | 51780 | RNAseq | -0.2312 | 0.4240 | |
| SRP064894 | KDM3B | 51780 | RNAseq | -0.4747 | 0.0142 | |
| SRP133303 | KDM3B | 51780 | RNAseq | 0.0864 | 0.7443 | |
| SRP159526 | KDM3B | 51780 | RNAseq | -0.2363 | 0.4877 | |
| SRP193095 | KDM3B | 51780 | RNAseq | -0.2377 | 0.0023 | |
| SRP219564 | KDM3B | 51780 | RNAseq | -0.3687 | 0.1951 | |
| TCGA | KDM3B | 51780 | RNAseq | -0.1121 | 0.0075 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by KDM3B expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of KDM3B:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | KDM3B | 51780 | 3 | 10 | 17 | |
| GSE20123 | KDM3B | 51780 | 4 | 10 | 16 | |
| GSE43470 | KDM3B | 51780 | 4 | 5 | 34 | |
| GSE46452 | KDM3B | 51780 | 0 | 27 | 32 | |
| GSE47630 | KDM3B | 51780 | 0 | 21 | 19 | |
| GSE54993 | KDM3B | 51780 | 9 | 1 | 60 | |
| GSE54994 | KDM3B | 51780 | 3 | 13 | 37 | |
| GSE60625 | KDM3B | 51780 | 0 | 0 | 11 | |
| GSE74703 | KDM3B | 51780 | 3 | 4 | 29 | |
| GSE74704 | KDM3B | 51780 | 3 | 4 | 13 | |
| TCGA | KDM3B | 51780 | 3 | 37 | 56 |
Total number of gains: 32; Total number of losses: 132; Total Number of normals: 324.
Somatic mutations of KDM3B:
Generating mutation plots.
Highly correlated genes for KDM3B:
Showing top 20/795 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| KDM3B | ARFGAP2 | 0.805188 | 3 | 0 | 3 |
| KDM3B | ADHFE1 | 0.768348 | 3 | 0 | 3 |
| KDM3B | PITPNM3 | 0.765044 | 3 | 0 | 3 |
| KDM3B | CPT2 | 0.762373 | 3 | 0 | 3 |
| KDM3B | ZFP3 | 0.760892 | 3 | 0 | 3 |
| KDM3B | RGS14 | 0.75726 | 3 | 0 | 3 |
| KDM3B | XPA | 0.752319 | 3 | 0 | 3 |
| KDM3B | ECH1 | 0.747933 | 3 | 0 | 3 |
| KDM3B | ATP6V0D1 | 0.746125 | 3 | 0 | 3 |
| KDM3B | KCNK2 | 0.745033 | 3 | 0 | 3 |
| KDM3B | ITPRIP | 0.744846 | 3 | 0 | 3 |
| KDM3B | SNX12 | 0.740137 | 3 | 0 | 3 |
| KDM3B | SP1 | 0.726511 | 3 | 0 | 3 |
| KDM3B | SPRYD4 | 0.720993 | 3 | 0 | 3 |
| KDM3B | CYLD | 0.720821 | 4 | 0 | 4 |
| KDM3B | YIPF4 | 0.718465 | 4 | 0 | 4 |
| KDM3B | FAM122C | 0.718391 | 3 | 0 | 3 |
| KDM3B | CLTB | 0.718166 | 3 | 0 | 3 |
| KDM3B | SH3PXD2A | 0.716296 | 3 | 0 | 3 |
| KDM3B | WDFY1 | 0.715877 | 4 | 0 | 3 |
For details and further investigation, click here
