SPRYD4

 

Full name: SPRY domain containing 4 Alias Symbol: DKFZp686N0877
Type: protein-coding gene Cytoband: 12q13.3
Entrez ID: 283377 HGNC ID: HGNC:27468 Ensembl Gene: ENSG00000176422 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of SPRYD4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SPRYD4 283377 225616_at -0.3630 0.3140
GSE26886 SPRYD4 283377 225616_at -0.7418 0.0034
GSE45670 SPRYD4 283377 225616_at 0.0867 0.5757
GSE53622 SPRYD4 283377 42686 -0.3817 0.0016
GSE53624 SPRYD4 283377 42686 0.0538 0.5354
GSE63941 SPRYD4 283377 225616_at 1.4303 0.0004
GSE77861 SPRYD4 283377 225616_at -0.3581 0.0401
GSE97050 SPRYD4 283377 A_23_P411612 0.0021 0.9939
SRP007169 SPRYD4 283377 RNAseq -0.4816 0.3058
SRP008496 SPRYD4 283377 RNAseq -0.4195 0.1296
SRP064894 SPRYD4 283377 RNAseq -0.2512 0.0736
SRP133303 SPRYD4 283377 RNAseq -0.1686 0.2798
SRP159526 SPRYD4 283377 RNAseq -0.4127 0.0492
SRP193095 SPRYD4 283377 RNAseq -0.2351 0.0119
SRP219564 SPRYD4 283377 RNAseq -0.4251 0.2512
TCGA SPRYD4 283377 RNAseq 0.1130 0.0944

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by SPRYD4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SPRYD4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SPRYD4 283377 7 2 21
GSE20123 SPRYD4 283377 7 1 22
GSE43470 SPRYD4 283377 3 0 40
GSE46452 SPRYD4 283377 8 1 50
GSE47630 SPRYD4 283377 10 2 28
GSE54993 SPRYD4 283377 0 5 65
GSE54994 SPRYD4 283377 4 1 48
GSE60625 SPRYD4 283377 0 0 11
GSE74703 SPRYD4 283377 3 0 33
GSE74704 SPRYD4 283377 4 1 15
TCGA SPRYD4 283377 14 10 72

Total number of gains: 60; Total number of losses: 23; Total Number of normals: 405.  


 

Somatic mutations of SPRYD4:

 

Generating mutation plots.

 

Highly correlated genes for SPRYD4:

 

Showing top 20/807 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SPRYD4POLE30.827588303
SPRYD4RASAL20.810618303
SPRYD4QRICH10.783349404
SPRYD4UGP20.767223303
SPRYD4C1orf560.762554303
SPRYD4SLC35D20.761101303
SPRYD4MEAF60.759194303
SPRYD4RUFY10.752729403
SPRYD4RPS140.752517303
SPRYD4MCCC20.749739303
SPRYD4TRAPPC10.748112303
SPRYD4TP53RK0.74805303
SPRYD4DENND4C0.747799303
SPRYD4ZNF7470.746396303
SPRYD4NCOA10.743514303
SPRYD4LEPROT0.741526303
SPRYD4YPEL30.74094303
SPRYD4PDCD6IP0.739857404
SPRYD4MBNL30.735971403
SPRYD4COPZ10.735881606

For details and further investigation, click here